Gene Pden_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1517 
Symbol 
ID4581113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1479986 
End bp1480243 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content60% 
IMG OID639768832 
ProductXRE family transcriptional regulator 
Protein accessionYP_915313 
Protein GI119384257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.788491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.176287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTGCA TGATCACCTC CCGACAATCG CGGGCCGCGC GTGCGCTTCT TGGATGGACA 
CAGGAGCAGC TTGCGGATGA GGCCCGGGTA TCTTTGACCG CGCTCAAGCG CCTCGAATCC
GAAAGCGGGC TCGAGGTTTA CGAGACCACG CGCGATCAGG TTCGACGGGC TTTTGAAGCG
AATGGCATTC TGCTCCTGAA CTCCGACCAG GGGATAGGAG TGATGCATGT TCAGGCGAAG
GCCGTCCCGA AGGGCTGA
 
Protein sequence
MICMITSRQS RAARALLGWT QEQLADEARV SLTALKRLES ESGLEVYETT RDQVRRAFEA 
NGILLLNSDQ GIGVMHVQAK AVPKG