12 homologs were found in PanDaTox collection
for query gene Pcryo_2137 on replicon NC_007969
Organism: Psychrobacter cryohalolentis K5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007969  Pcryo_2137  hypothetical protein  100 
 
 
806 aa  1633    Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4937  hypothetical protein  39.04 
 
 
822 aa  558  1e-157  Pseudomonas putida W619  Bacteria  hitchhiker  0.000000992532  decreased coverage  0.0000000106484 
 
 
-
 
NC_009832  Spro_1540  AAA ATPase  21.88 
 
 
778 aa  60.5  0.0000001  Serratia proteamaculans 568  Bacteria  decreased coverage  0.000000740195  normal 
 
 
-
 
NC_009767  Rcas_3701  SARP family transcriptional regulator  24.75 
 
 
1064 aa  52.8  0.00003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  decreased coverage  0.000000037794 
 
 
-
 
NC_009972  Haur_2768  SARP family transcriptional regulator  24.54 
 
 
1050 aa  52  0.00005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1171  putative transcriptional regulator  25 
 
 
846 aa  48.1  0.0006  Shewanella pealeana ATCC 700345  Bacteria  normal  0.229503  n/a   
 
 
-
 
NC_013947  Snas_4139  transcriptional regulator, SARP family  24.79 
 
 
983 aa  47  0.001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.180514 
 
 
-
 
NC_013161  Cyan8802_1328  peptidase S1 and S6 chymotrypsin/Hap  25.59 
 
 
810 aa  46.2  0.002  Cyanothece sp. PCC 8802  Bacteria  normal  0.929548  normal  0.0143336 
 
 
-
 
NC_009972  Haur_1112  NB-ARC domain-containing protein  22.84 
 
 
447 aa  45.8  0.003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0411959  n/a   
 
 
-
 
NC_012793  GWCH70_2496  Tetratricopeptide TPR_2 repeat protein  26.92 
 
 
222 aa  45.4  0.004  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1787  TPR repeat-containing protein  28.93 
 
 
543 aa  44.7  0.006  Methanococcus maripaludis C6  Archaea  normal  0.662156  n/a   
 
 
-
 
NC_013730  Slin_4396  Tetratricopeptide TPR_2 repeat protein  24.82 
 
 
602 aa  44.7  0.007  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
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