| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4396 |
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| Symbol | |
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| ID | 8728156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5330953 |
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| End bp | 5332761 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003389176 |
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| Protein GI | 284039246 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCACG ACACGCCGAC CAACATGAAT TCAGCATATT CTACATATCG AAGCCATCGG
CTACTCATCG GATTAGCAAG TAGTGTAGGT CTGCTCCTTT GCCTGGCCGA TTTACCTGCC
GTAGCACAGC GCAAACGCGA TAAAGCCGAT ACCGCTCTGG CTAAACCCGG CTCTACCTCG
ACCACTACCG TTCGGATGGA GGCCGAAACG CAGTTTACGG ATGGTATCCG GTATTTGATG
ACGGATGAAC CGTCTAAAGC CATTACTCAG TTTGCCAAAG TGCTGCAAAA AGACCCCAAC
AATGCAGCCG CTCAATACTC CACAGCCAGC GCGTACCTCA AAAGTGGAAA AGTGACCGAA
GCCCTTCCAT TTGCGGCTAA AGCGCATGCC CTGGATGTCG ACAATAAATT TTATTCCCTG
CTGCTGGCAG AACTTTACGT CAAGCAGAAG CGGTACGGCG AGGCCGAAGA CCTCTACGAA
GCCTTGTTGA AAAAAGGACC CGAAAACGCA GAATATGGCG TTGAACTGGC GGCTATCTAC
CTCTTCAATG AAAAGCCCGA CAAGGCGCTG GAAGCGTATA ATAAAGTAGA GCGTGAGCTG
GGTTTGAATG AAGAAATTAC CCGGCAGAAG CAACGCATCT ACCTCAAGCA GAACAAAATT
GAGAAGGCCA TTGAAGAAGC TGAGAAATTG GTGGCATCGG AACCCTCCGA CCCCGACTAC
CTGCTCGAAG GCGCCGAACT GCTCATTGCT AACGACCGGC CCGATCAAGC CATCGGCTGG
ATTGACCGGG CCCTTAAGTT AAGCACCGAT TTGCCCCAGG CGCATGTGCT GCTGGCCGAT
ATCTACCGTA AAAAGGGGGA TATGGACCGG GTTAGTAAAG AACTGAACCA GGTACTGGCC
AATCCAAACC TCGAAGCCGG TCTGAAAGCC CGAATCCTGT CGAGCTACAT GGGTATGACC
GGTTCCAATA CCGCAGCGCA GCAGGATGCC CTGGCTATGG CGCAGAACCT GGCCAAAACA
TCGCCCAACG ACCCCAAAAC ACAGGTAATG CTAGCCGATC TGCTTATGCA GCAGGGCAAA
AAAGCCGAAG CCCGCGATAC GTACGCCAAA GCTGCCCGTC TGGACGGCTC TATTTATGAA
GTTTGGGGAG CCCTGCTACA GCTCGATAAC GAACTGAATC AGGTTGATAG CCTCCTCATC
CACTCCGAAA AGGCGCTGGA AGTCTTTCCA ACACAGGGGC TGTTCTGGTA CTCCAACGGG
TCGGCCAATC TATACAAGCG CCGGTATCAG CAGGCCGTTG ACGCCCTCGA AGAAAGTCAG
AAGCTGCTGG CTGCTAGTTC GAGCAACGAG CTAAAAAAGG GAATCAGTGC CCAGTTGGGT
GATGCGTACA ACGGTCTTGG CGATTATGCC AAATCAAACG AATCGTACGA AGCCGTCCTG
AAAGTTGACC CCCTGAACGA CTACGTTCTG AACAATTACA GTTATTTCCT GTCTTTACGG
AAGGAAAACC TGCCTCGTGC TTTACAACTT GCCCAGAAAC TCGTTGAGCG CAACCCAACG
AATGCGACCT ATCTGGACAC CTACGCCTGG GTGCTTTATG TCTCGAAAGA TTACGCAAAA
GCAAAGCAGT ATCTCGAAAA AGCACTGGCC GATCCAGCAA ACGTGAGCGG AACCATTATT
GAACATTATG GCGATGCGCT TTACCAGTTG GGCCAGGCCG ACAAGGCACT TGAACAGTGG
AAGAAAGCGA AGATGAAAGG TGGTGCCAGC CCCGATATAG ATAAGAAAAT AACCTCTGGC
AAAATGTAA
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| Protein sequence | MHHDTPTNMN SAYSTYRSHR LLIGLASSVG LLLCLADLPA VAQRKRDKAD TALAKPGSTS
TTTVRMEAET QFTDGIRYLM TDEPSKAITQ FAKVLQKDPN NAAAQYSTAS AYLKSGKVTE
ALPFAAKAHA LDVDNKFYSL LLAELYVKQK RYGEAEDLYE ALLKKGPENA EYGVELAAIY
LFNEKPDKAL EAYNKVEREL GLNEEITRQK QRIYLKQNKI EKAIEEAEKL VASEPSDPDY
LLEGAELLIA NDRPDQAIGW IDRALKLSTD LPQAHVLLAD IYRKKGDMDR VSKELNQVLA
NPNLEAGLKA RILSSYMGMT GSNTAAQQDA LAMAQNLAKT SPNDPKTQVM LADLLMQQGK
KAEARDTYAK AARLDGSIYE VWGALLQLDN ELNQVDSLLI HSEKALEVFP TQGLFWYSNG
SANLYKRRYQ QAVDALEESQ KLLAASSSNE LKKGISAQLG DAYNGLGDYA KSNESYEAVL
KVDPLNDYVL NNYSYFLSLR KENLPRALQL AQKLVERNPT NATYLDTYAW VLYVSKDYAK
AKQYLEKALA DPANVSGTII EHYGDALYQL GQADKALEQW KKAKMKGGAS PDIDKKITSG
KM
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