| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2768 |
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| Symbol | |
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| ID | 5734649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3522599 |
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| End bp | 3525751 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641279911 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001545534 |
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| Protein GI | 159899287 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATGTCA CGCATCAGCC TGATGATTCG GCTCAATCGG TGCCAAGTTT ACGGATTCAC
GTTTTTGGCG GCTTGCGGAT CTTTATCGAC AATCAACGCA TTAGTGATCT AGCAACTCGC
AAAGTGGAAG CACTGCTGAT CTACCTTGTC GTCAATCCTT ACCCCCACGA ACGTGAGGTT
TTGGCACAAC TGTTATGGAA TGATTTATCG GCAGAACGCA CGGCGGGCAA CTTACGCCTC
ACACTCAATC AATTACGCAA AGTGATGGAC CCGTTTATTG AGGTCACGCG CCATACGATC
GGGTTGCATC CCCAAGCCCG TTATTGGCTC GACCTTCAGC ATTGCACCCA AATTTTTGAG
AACCCAGCTA GCCCAACCAA CGAATTAGCC AGCGCGATCG AACATTATCA AGGCGATTTT
CTCAATGGGT TTTATCTCCG CGATGCCGAT GGCTTCAGCA GCTGGCAACT CCAACAGGTA
GAATATTGGC GACAACAAGC GCTGGTCGCG ATTCGCCGCC TGATCGAACG CTATACCGTG
GTAAGCAACT ACAACGAGGC AATTCGTTGG CTTCAGCGCT TGGTGACGCT TGATGAATGT
GATGAGGTCG CCCATCGCCA GTTGATGTTG CTGTTGATGC GCACCGGCCA ACGCCACACT
GCCCTGCGCC AATATCGGCT GCTCGAACAA GTTTTAGAGC GTGAGTATGG ATTAAAACCC
GAGCCAGCGA GTGAGGCCTT GCAGCGCCAA ATTATGGCAA CACCCGCCCA ACGTCCGCAT
CGGTTGATTC GGCCAACTCC AATGCTCTAT GGTCGCCAAA CTGAGCTAGA ACGCATGACC
CATTGGCTGG CGGCTGAACG TAACCAACTG TTGACGATTA TGGGCGCTGG CGGGAGCGGC
AAAACCCAAT TAGCCCTGAC CTTTGGCTGG AAGGTGGTCA ACGAATATTT AGGGGCTTCG
AGCAACGGAG TTTTTTATAT TTCCTTGGTC AGTGCCGATC AACAGCCGCG CCTGTTGGAT
GCAGAACCTG TGTTGTTGGC AATTGTGCAG ACCTTAAACC TACCACCACC ACGCACCAAC
GATCTGGTTG AACACCTGAT TCTCCAGTTG CAACAGCATG AATTGATCAT CATCATTGAT
AATGGCGAAT TGTTGGCGAC TAGCGCTCGC TTAGCCCTCA GCAGTCTGAT TCAACATATT
CCGCAATTGC GCTTAATTAT TGGCTCGCGC GAGCGCATGC GCCTGCAAAA CGAATATGTA
TTGGAATTAG CAGGCTTGGC CTATCCCCAG ATTAATGATG ATTCAGGCTA TTCGCCGCTG
TTGGCCGAGC AACTTCAGCA TTTTGCAGCG GTCGATTTAT TTGTGCATTG TTTGCAGCGG
CAAGGCAAAT CGGGCGATTT GGCCGATTAT AGCCACGCTG ATCGTCAAGC GATTGGCCAA
ATTTGCCAGA TGGTCCATGG CCTGCCGTTG GCAATTGAAT TGATCGCGCC ATGGATGACC
ATTCGTAGTG GCCATGAAAT TGTCGAGGCA CTCAGCAATG ACATGCAGCT TTTTCATAGC
GATGTGGTCG ATATTCCAAC CCGCCATCGC AGCATCCAGG CCGCCTTTGA TTATTCGTGG
CAATTGCTTG ATCCGCATGA ACAGGCTTGT CTAGCACGCT TGGCGGTATT TCCTAGTAGC
TTTAATGCTG AAACCGCCAC AATCATTGCC GAGGTCGATT TGAACGTGCT GGCCAATTTA
CGGGCCAAAT CGTTGCTCAC GCTTGAAATT TTGCAACAAC AAACCCGCTA TGCCTTACAC
CCATTGCTGC ATCAATTTGC CCAAACCAAA CTCCAAGGCT TGGCCGCCGA TCAGCAAACG
CTGTATCAAC GCCATGCCCG CTACTTTGGC CAATTTAGCC GTCAGCAAGA GCAATTAATT
CATGGCAACG CCAGCCAACA AGGGTTAATG CTCTTAGAAC AAGAGCTTGA TAATATTCGG
GGTGGTTGGC TCTGGGCGGT TCAAGCCCAA CAAATTCATA TTTTAGGCGA TTATTGTATT
GCTTTACACG ATTTCTTTGC GATTCGCAAC CGCGAGATCG AAGGCCAACA GCTTTTTGCT
CCAGCCGCAG CGTTATTAAG CACGCTTGAC CATCAGGATG TTGAGGCTGA GATCGTTTTA
ATTGTAGTGC GAATTGTTTC GTGTTACGCT GAGTTTCATT ATATTTTGGG CGAATTAGCA
CGTTCTGAGG CATTATTGCA ACAGTGTATC GATGTCTTGT ATCGAAGGCA ATTGCAGAAT
GTGGCTGAAT TGTTGTTTAT TTATAAGCAA CTTGGGGTGA TTACCCAACG CCGAGGCGAA
TATACCCGCG CCCTTGATCT ATTACAACGC TGTTTGGCTC AGGCTGAAAG CGTCAACGAT
CCAATTAAAG TCAGTGATAC ATGGTTATCG ATCGGCGCGG TGTTGTTGGC ACAAGGCAAT
TGGCAAGCCG CCGAACAAGC CTTCCAGACC TGTAGCGATC ACTATCAAGC CCAAAAACAT
CTGTGGGGGT TATGCCATAG TCAACGCTTT TTGGGGGTGG TGGCGCTGGC ACAAGCCAAT
TATAATCTGG CTCAGCATCA TTTTGAGGCC AGCCTTGATT TGGCCTATCA GCTCAAAACC
CCGCTTGGCG AGGCATTAAT TCGCGATCAA ATGGGCATGT TGGCGCTGCG CCGCGAAGAT
TTTGCCCAAA GTGCGGGCTA TTTGCACAAA GCCTTTGCCA TTTTTCAAGA ACTAGGGGTT
GAGGCCATGA TTGGACGGGC GGCGATTCAT CTAGCCCAAC TCGAATTGGC GCAACGTCAT
TTTCAATATG TGCAGCCATG GTTGGCGCGG GCGATTATGG TTGCTCAGCA ACGCCAAGAA
ATCCCGCTAT TGCTCGAATG TTATGCGACA GTTTTGCAAT TTTGGGCGGC GGTTTGCGAT
GGCGAGCCAA GCCATTGGTT CAAACTATGG CATAGCTTGA GCCAACATCC AGCCTGTAGT
GCCGAAACCA AAAGTTTGCT CAATCGTTTA CAGTTGCACC AGCATTCCGC AGGCCAAAGC
AGGCCGACGA TTGAGGTTGA ACTGTCAGGA ATTGAACGCT ATGTAGCCCT TTGCTTAAGC
CAAATTGAGC AAAGCCAGAG TATTGCGGTT TAG
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| Protein sequence | MNVTHQPDDS AQSVPSLRIH VFGGLRIFID NQRISDLATR KVEALLIYLV VNPYPHEREV
LAQLLWNDLS AERTAGNLRL TLNQLRKVMD PFIEVTRHTI GLHPQARYWL DLQHCTQIFE
NPASPTNELA SAIEHYQGDF LNGFYLRDAD GFSSWQLQQV EYWRQQALVA IRRLIERYTV
VSNYNEAIRW LQRLVTLDEC DEVAHRQLML LLMRTGQRHT ALRQYRLLEQ VLEREYGLKP
EPASEALQRQ IMATPAQRPH RLIRPTPMLY GRQTELERMT HWLAAERNQL LTIMGAGGSG
KTQLALTFGW KVVNEYLGAS SNGVFYISLV SADQQPRLLD AEPVLLAIVQ TLNLPPPRTN
DLVEHLILQL QQHELIIIID NGELLATSAR LALSSLIQHI PQLRLIIGSR ERMRLQNEYV
LELAGLAYPQ INDDSGYSPL LAEQLQHFAA VDLFVHCLQR QGKSGDLADY SHADRQAIGQ
ICQMVHGLPL AIELIAPWMT IRSGHEIVEA LSNDMQLFHS DVVDIPTRHR SIQAAFDYSW
QLLDPHEQAC LARLAVFPSS FNAETATIIA EVDLNVLANL RAKSLLTLEI LQQQTRYALH
PLLHQFAQTK LQGLAADQQT LYQRHARYFG QFSRQQEQLI HGNASQQGLM LLEQELDNIR
GGWLWAVQAQ QIHILGDYCI ALHDFFAIRN REIEGQQLFA PAAALLSTLD HQDVEAEIVL
IVVRIVSCYA EFHYILGELA RSEALLQQCI DVLYRRQLQN VAELLFIYKQ LGVITQRRGE
YTRALDLLQR CLAQAESVND PIKVSDTWLS IGAVLLAQGN WQAAEQAFQT CSDHYQAQKH
LWGLCHSQRF LGVVALAQAN YNLAQHHFEA SLDLAYQLKT PLGEALIRDQ MGMLALRRED
FAQSAGYLHK AFAIFQELGV EAMIGRAAIH LAQLELAQRH FQYVQPWLAR AIMVAQQRQE
IPLLLECYAT VLQFWAAVCD GEPSHWFKLW HSLSQHPACS AETKSLLNRL QLHQHSAGQS
RPTIEVELSG IERYVALCLS QIEQSQSIAV
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