| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1787 |
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| Symbol | |
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| ID | 5737325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1677096 |
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| End bp | 1678727 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641284287 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001549830 |
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| Protein GI | 159906168 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.662156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGTTA TTTTGAAATT AAAGGGGGTT TTAATATTAT TTTCAATTTT TTTTATTATG
AATACCTGTT ATGCAAACAC CATCGACGGA AAAACTTCTG AAGACTGGTT TGATGAAGGA
CTAAACTATT ACGATAATGA AAATTATGAA AAATCGATTG AATGTTTTAA TAACGCTTTA
GAATTGGATC CGTATGATAA AACTGCATGG TTTAATAAAG GATACATCCT CTATGGAATT
TACAGGTCAA ATGAAGCATT AGTATGTTTT GACAAAGTTT TAGAATTGGA TCCTGAAGCT
TTCGATGCAT GGCTCTATAA AGGATACACA TACTACGACC TCGATAATTA TCAAAAAACT
ATAGAATGTT TGGATAAAGC ATTAGAACTA GACCCTGAAA ATTTAGATGC ATACTACTGT
GAAGGAGACT CATATTATTT CCTTGAACGA TACGAAGAAT CTTTAGAATG TTACAATAGG
GCATTGGAAT TAAATCCAAC ATACACATCC CTATTGGTAG ATAAAGGGAC TTCACTCCAT
AAACTTGGAA GATACGAAGA AGCTATCATA TGTTATGATA AAGCTTTAAA AATAGATCCT
AATTATGCAT ATGCCCTGAG TAATAAAGGA TTATCTCTTT ATGATCTTGG AAGATACGAA
GAATCCATAG AATGCTACGA TAAAGCTTTG AAATCAAATT CTGGTTACTC TTATGTATGG
TATAATAAAG GACTGGCTCT TTATGATATG GGGAGATATG AGGAAGCTAT CGGATGTTAT
AATCGCGCTA TTGAACTAGA TTCTAATGAC ATTGATAGTT GGAATAATAA AGGACTGGCT
CTTTATGACC TTGGAAGATA CGAAGAAGCT ATAGTTTGTT ACGATAGGGC GTTAGAACTA
GATTCCAATT ATTCCGATAG CCAGTATAAT AAAGGACTGG CTCTTCAGTA TCTTGAAAGA
TACGATGAAG CCATCGTATG TTACGATAAA ACGTTAGAAT TAAATCCAGA AGATACAGAT
AGCTGGTGTA ACAAAGGAAT TTCCCTTCAT GAAGTTGGAA GATACGAAGA AGCAATTGAA
TGCTACGATA AATCATTGGA ATTAAATCCC GAAGACGTTG ATATTTTGTA TAATAAAGGT
AATTCACTTT ATGACCTTGG AAGATACGAA GAAGCTGTTC AATTCTACAA TAACGCATTA
AATATAAACT CAAGCTGTTC GGATGCATGG CATAATAAAG GACTGGCTCT TCACGATCTT
GGAAAATACG AAGAAGCTAT CGGATGTTAT AATCGCGCTA TTGAACTAGG TCCGAACAAC
AGTGATAGTT GGAATAATAA AGGTAATTCA CTTTATGACC TTGGAAGATA CGAAGAAGCA
ATTGAATGCT ACGATAAATC ATTGGAATTA AATCCTAATT ATTCCGATAC TTGGTATAAT
AAGGGATTAT CTCTTTGTAA ACTTGGACGA TACGAAGAAG CTATCGAATA CTATGGTAGA
GCATTGGAAT TAAATCCTAG CGATGAAGAA GCAGAACTTG GAAAACAATA CGCCGAAAAT
CAACTCAATA GTGGGTTAAA TATCTTAAAA AATGTATTTG AAATGATTTT TAGTATTTTT
GGATCCGCAT AA
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| Protein sequence | MVVILKLKGV LILFSIFFIM NTCYANTIDG KTSEDWFDEG LNYYDNENYE KSIECFNNAL
ELDPYDKTAW FNKGYILYGI YRSNEALVCF DKVLELDPEA FDAWLYKGYT YYDLDNYQKT
IECLDKALEL DPENLDAYYC EGDSYYFLER YEESLECYNR ALELNPTYTS LLVDKGTSLH
KLGRYEEAII CYDKALKIDP NYAYALSNKG LSLYDLGRYE ESIECYDKAL KSNSGYSYVW
YNKGLALYDM GRYEEAIGCY NRAIELDSND IDSWNNKGLA LYDLGRYEEA IVCYDRALEL
DSNYSDSQYN KGLALQYLER YDEAIVCYDK TLELNPEDTD SWCNKGISLH EVGRYEEAIE
CYDKSLELNP EDVDILYNKG NSLYDLGRYE EAVQFYNNAL NINSSCSDAW HNKGLALHDL
GKYEEAIGCY NRAIELGPNN SDSWNNKGNS LYDLGRYEEA IECYDKSLEL NPNYSDTWYN
KGLSLCKLGR YEEAIEYYGR ALELNPSDEE AELGKQYAEN QLNSGLNILK NVFEMIFSIF
GSA
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