18 homologs were found in PanDaTox collection
for query gene Patl_1144 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_1144  stress responsive alpha-beta barrel  100 
 
 		 157 aa  323  6e-88  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.17953  n/a   
 
 
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NC_011138  MADE_01541  Stress responsive alpha-beta barrel  62.5 
 
 		 97 aa  134  6.0000000000000005e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
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NC_013037  Dfer_1578  Stress responsive alpha-beta barrel domain protein  48.87 
 
 		 135 aa  126  1.0000000000000001e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.247045  normal  1 
 
 
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NC_010571  Oter_1073  stress responsive alpha-beta barrel domain-containing protein  53.12 
 
 		 142 aa  117  4.9999999999999996e-26  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
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NC_007912  Sde_1763  transcription-repair coupling factor  51.89 
 
 		 108 aa  117  7.999999999999999e-26  Saccharophagus degradans 2-40  Bacteria  normal  0.356996  normal  1 
 
 
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NC_013730  Slin_0488  Stress responsive alpha-beta barrel domain protein  43.06 
 
 		 133 aa  115  1.9999999999999998e-25  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.152282 
 
 
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NC_013132  Cpin_5601  Stress responsive alpha-beta barrel domain protein  40.71 
 
 		 140 aa  101  5e-21  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00880614  normal  1 
 
 
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NC_009511  Swit_1629  stress responsive alpha-beta barrel domain-containing protein  48.96 
 
 		 135 aa  100  7e-21  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
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NC_013037  Dfer_3402  Stress responsive alpha-beta barrel domain protein  46.32 
 
 		 99 aa  99  2e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.276263  normal  1 
 
 
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NC_013730  Slin_4395  Stress responsive alpha-beta barrel domain protein  46.94 
 
 		 99 aa  96.3  1e-19  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
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NC_013132  Cpin_0827  Stress responsive alpha-beta barrel domain protein  45.83 
 
 		 100 aa  85.9  2e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
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NC_013037  Dfer_5679  stress responsive alpha-beta barrel domain- containing protein  34.69 
 
 		 137 aa  79.3  0.00000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.281703  normal  1 
 
 
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NC_013061  Phep_2435  Stress responsive alpha-beta barrel domain protein  37.11 
 
 		 98 aa  79.3  0.00000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.23719  normal  1 
 
 
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NC_010571  Oter_4112  stress responsive alpha-beta barrel domain-containing protein  37.11 
 
 		 99 aa  77.4  0.00000000000008  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
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NC_008255  CHU_1665  hypothetical protein  31.58 
 
 		 98 aa  72.8  0.000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0308799  normal  0.297476 
 
 
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NC_014148  Plim_3871  Stress responsive alpha-beta barrel domain protein  28.87 
 
 		 103 aa  52  0.000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.955674  n/a   
 
 
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NC_002977  MCA0759  hypothetical protein  32.63 
 
 		 101 aa  47.8  0.00006  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
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NC_007517  Gmet_0507  hypothetical protein  39.51 
 
 		 123 aa  43.1  0.001  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.0000108324  normal  1 
 
 
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