17 homologs were found in PanDaTox collection
for query gene Dfer_1578 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_1578  Stress responsive alpha-beta barrel domain protein  100 
 
 		 135 aa  278  2e-74  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.247045  normal  1 
 
 
-
 
NC_008228  Patl_1144  stress responsive alpha-beta barrel  48.87 
 
 		 157 aa  126  1.0000000000000001e-28  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.17953  n/a   
 
 
-
 
NC_010571  Oter_1073  stress responsive alpha-beta barrel domain-containing protein  57.14 
 
 		 142 aa  124  3e-28  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_01541  Stress responsive alpha-beta barrel  58.33 
 
 		 97 aa  123  7e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0488  Stress responsive alpha-beta barrel domain protein  44.62 
 
 		 133 aa  115  1.9999999999999998e-25  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.152282 
 
 
-
 
NC_009511  Swit_1629  stress responsive alpha-beta barrel domain-containing protein  42.74 
 
 		 135 aa  111  3e-24  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_5601  Stress responsive alpha-beta barrel domain protein  41.96 
 
 		 140 aa  100  1e-20  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00880614  normal  1 
 
 
-
 
NC_007912  Sde_1763  transcription-repair coupling factor  44.12 
 
 		 108 aa  95.9  2e-19  Saccharophagus degradans 2-40  Bacteria  normal  0.356996  normal  1 
 
 
-
 
NC_013037  Dfer_3402  Stress responsive alpha-beta barrel domain protein  41.67 
 
 		 99 aa  95.9  2e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.276263  normal  1 
 
 
-
 
NC_013730  Slin_4395  Stress responsive alpha-beta barrel domain protein  42.86 
 
 		 99 aa  90.9  6e-18  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_0827  Stress responsive alpha-beta barrel domain protein  42.27 
 
 		 100 aa  87.8  4e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_5679  stress responsive alpha-beta barrel domain- containing protein  30.77 
 
 		 137 aa  82.4  0.000000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.281703  normal  1 
 
 
-
 
NC_008255  CHU_1665  hypothetical protein  41.24 
 
 		 98 aa  82.4  0.000000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0308799  normal  0.297476 
 
 
-
 
NC_013061  Phep_2435  Stress responsive alpha-beta barrel domain protein  42.27 
 
 		 98 aa  81.3  0.000000000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.23719  normal  1 
 
 
-
 
NC_010571  Oter_4112  stress responsive alpha-beta barrel domain-containing protein  35.05 
 
 		 99 aa  71.6  0.000000000003  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002977  MCA0759  hypothetical protein  34.74 
 
 		 101 aa  53.1  0.000001  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_3871  Stress responsive alpha-beta barrel domain protein  28.57 
 
 		 103 aa  40.4  0.008  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.955674  n/a   
 
 
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