Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1763 |
Symbol | |
ID | 3966669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2251498 |
End bp | 2251824 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637920846 |
Product | transcription-repair coupling factor |
Protein accession | YP_527235 |
Protein GI | 90021408 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.356996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCA ATACCCACAA ACTACTCCAC ATGGTGTACT TCTGGCTAAA AGAAGAACAC ACCGAACATG ACAAAGCACA GTTAATTGAG GGGCTGCAGG GTTTAGCAGA TATCGACTTA ATAAAAGCGA TTCATATTGG CGTACCGGCC TCTACCCTGG AGCGCGACGT GATTGATAGC AGCTACCAAG TTTCACTTGT ATTGCAGTTT GATAACACAG AAGACCAAGA TGCCTACCAA ATTCACCCAA CACACTTAGC ATTTGTTGAT AAGTGCAAGC ACCTTTGGCA ACGCGTTAAG GTATGCGATT CGATAAGTGC ACTTTAA
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Protein sequence | MHSNTHKLLH MVYFWLKEEH TEHDKAQLIE GLQGLADIDL IKAIHIGVPA STLERDVIDS SYQVSLVLQF DNTEDQDAYQ IHPTHLAFVD KCKHLWQRVK VCDSISAL
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