Gene Dfer_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1578 
Symbol 
ID8225149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1893643 
End bp1894050 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content53% 
IMG OID644929434 
ProductStress responsive alpha-beta barrel domain protein 
Protein accessionYP_003085986 
Protein GI255035365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.247045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATT CCCGTCGGAA ATTCATAGCA AGTTCCGTTA CATTGGCCGC TGGTGCTACC 
GCTTCCGTGG CGTCGCCGCT TGCTCCTGAG AAAAGCAAGT ACCCGCTCGT TCACCATGTT
TTTTTCTGGT TGAAAAACCC TGGTTCCAAG GCTGATCGCG ACAGGATTAT CGAAGGCCTG
AAAACGCTGC GGAAGATCGA GGCCATCAAG GATCTGCGAA TCGGCGTAGT GGCCAGCACG
GAAAAACGGG ACGTCGTGGA CAACAGCTGG GCGGTGTCCG AGCTCATGTT TTTTGAAGAC
CTTGCAGGCC AGGCCAGTTA CCAGGATCAC CCGATCCACC AGCAGTTTAT CAAGGATTGC
AGCCATCTGT GGGACAAAGT GATCGTATAT GACGCGATAG ATGTTTAG
 
Protein sequence
MTHSRRKFIA SSVTLAAGAT ASVASPLAPE KSKYPLVHHV FFWLKNPGSK ADRDRIIEGL 
KTLRKIEAIK DLRIGVVAST EKRDVVDNSW AVSELMFFED LAGQASYQDH PIHQQFIKDC
SHLWDKVIVY DAIDV