Gene Dfer_5679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5679 
Symbol 
ID8229295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6826726 
End bp6827139 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content50% 
IMG OID644933526 
Productstress responsive alpha-beta barrel domain- containing protein 
Protein accessionYP_003090034 
Protein GI255039413 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.281703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATC AATCGAGGAG ACAATTCCTG CAAAATGCCG GCCTGGCTTC GCTCACCTCC 
GTCAGCGGCA TCACCTCCGG CCCCGAAAGA AACAAGGAGC TTTTTGTCCA GCACATTTTC
TTTTACCTGA AAGAACCCAA TAATGCACAG CACGAGGCCC AACTGCTGGA AGGCCTGCAC
AAGCTCGCCA AAAGCTCCTA CATTCAGTTT GCGCACATCG GAAAGCCGGC GCATACGACC
GGCTCGGACA TCGTCAGGGA TTACTCCGTT TCGTGGATGT GTTTTTTTAA GAATATCATA
GAAGAGGAGA TTTTTAAATC GCATAAGATC TATCACGACT TTATCGCTGG ATACGCCCAC
TTATGGGAGA GAATGGTGAT CTACGATTCG GTAGGTCCCC GGAAGGTGGG TTGA
 
Protein sequence
MEDQSRRQFL QNAGLASLTS VSGITSGPER NKELFVQHIF FYLKEPNNAQ HEAQLLEGLH 
KLAKSSYIQF AHIGKPAHTT GSDIVRDYSV SWMCFFKNII EEEIFKSHKI YHDFIAGYAH
LWERMVIYDS VGPRKVG