7 homologs were found in PanDaTox collection
for query gene Patl_0886 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_0886  Ig-like, group 2  100 
 
 
582 aa  1181    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.226822  n/a   
 
 
-
 
NC_002967  TDE0362  Ig-like domain-containing protein  32.97 
 
 
647 aa  48.1  0.0005  Treponema denticola ATCC 35405  Bacteria  normal  0.318383  n/a   
 
 
-
 
NC_013204  Elen_2633  Ig domain protein group 2 domain protein  30.91 
 
 
234 aa  47.8  0.0005  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000622078 
 
 
-
 
NC_012034  Athe_2120  Ig domain protein group 2 domain protein  33.33 
 
 
1831 aa  47  0.0009  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.348208  n/a   
 
 
-
 
NC_013216  Dtox_3488  Ig domain protein group 2 domain protein  36.21 
 
 
428 aa  45.8  0.002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_1087  pullulanase family protein  28.57 
 
 
2638 aa  43.9  0.007  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3203  Ig domain-containing protein  31 
 
 
981 aa  43.9  0.008  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
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