Gene TDE0362 details

Gene Information

• Locus tag: TDE0362
• ID: 2741082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 407591
• End bp: 409534
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637159234
• Product: Ig-like domain-containing protein
• Protein accession: NP_970976
• Protein GI: 42525878

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.318383
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAAA GACAGAAATT AATAGGATTT GCGGCTATTG CAGCGTTTTT TTTGCTGCTA 
TCTTGTAAAA ACAATCTTTT AACAAAAACC GAAAAAGAGA AATCCGGTGA AATCCCCGTT 
AAAAACATTA TTCTTTCACC GAATAAAAGC GAATTTTCTC TTGAAAAAAA CACGGCACAG 
ACCATAACCG TGAAAATCAT ACCTGAAAAG GCGACAAATA AAGCACTAAT ATATTCTTCA 
AAACATGGAG ACATCGCTTC CATCGACAAC ACCGGTTTGA TTACGGCAAA AAAAGAAGGG 
CGCACGATCA TCACAATCGA GGCGTCAAAC GGCGTAAAAA AAACGATAGA CGTTATCGTA 
ACACCGGAAC CGATTCCCGT TACAAATATC GAATTTGAAG AAGAACCGCC AGCCTTTTTG 
TTCATCGGCG ATGTCTATAT ATTCAAAGCA AAGGCAAAAC CAGACGAAGC GACGAATAGA 
AAGCTCGAAT ACACCACGAT GACATCAGAT GTGATATCCG TTACCAATAC GGAATTAGGT 
ACGATGAAGG CAACAAAAGA AGGCAATGCA GCTATTACTA TTCGTTCAGC CTCCACTCCC 
TCGGTAGCCA AAACGGTTAC AATTGAAATT AAAAAGAAGC CGCAAATTAA GTATGAAGAA 
AAACAAGCTG TTATGCCCGA AAGTGCTGCC GGTACATATA CATTTGAAGT GCAAACGATA 
GACGGTAAAT TGGATTATGA ACCGTACTTT ACGTCGAGTA CTTTACCGTG GATTACAGGA 
GCGCCGACAA TCAGTTCACG AACCGATCCC AATAAGGACG TAATTTCATT TACCTGCCTC 
AAAAACAAAA CCGTGTGGAA CAGGCGTGCA TACATTAAAT TCAAAGACAA AAAAACAGGT 
CAATATATTA AAGGCGCTGA CGGAAAAGCG GATTTGACCG TAAACATTAT TCAAAAAAAG 
AATGAGAATC CCGTTGTGCA TTACAAATGG GTCGATGGAA TAGGAGCACC TACTGAAAAC 
CAAAAAATAA AGATGAAAAT AAAAAACAAC GGTATTGAGA CAGAGGATTA TTTTACGGAC 
CCGTTCGTGT TCAAATGGAA AGAAACTGCC GATACAAAAT TTTATAATGT GCGGAAATTA 
GATAAGTTGT ATGTACAAGG GCAATTTCCA AGTAATTATT TCGTGATAAA CGGTATAAGA 
AATGAACAAA TACAAGGGCG AGATATTAGC CAATGCTGGG CAAAAACCGC TTCCAATATG 
CTGCACTGGT GGTTTGAACA AAATAAAGAC TATATTGAGC AGTATAAGCA AAAAGCTGCC 
ATTGAAGAGT GGAAACGGCC TTTATATAAG CATGATTATA TCCGAGGCTT GCAGGATGAA 
GACGAAGGCA AAAAAAGCAA TATAGCCAAT ATCTTTAGAG CATATTCCCA TAACAATGCC 
CGAGGCGGTT ACATAGAAGA CGGGCTGACG TGGTACCTGT ATAAAAGAGA CGGTCAAAAA 
AATCTAGGTT CAATCTATCC CGGGCTATTC AATGATGTTT TCGCGCATGA TACAAGCCCT 
ATTAATATTG AGCGATGTGA AACAAAAAAA GAATTTGAAC AGCTTATGAA TAAAACCCTT 
GATAACAAAC GGGCAATAGG AATTTTTTGG CAGGGTTCTA AAGGTAACAG GCCATACCAA 
CATGCCGTAA CGTGTTGGGG CGCAGCCTAT GACGAAGATA ATAATATTAT CTGTCTCTAT 
ATTGCCGAAT CAAACTTACC GGAAGCTGTC CTCTATCCAT TCGGCGTTAG ATACAAAGGC 
AATATATATG AAGAAGCTGA AAAGAACAGA ACATATATGT TCAATTATGC GTTAAGCAAA 
CCTGAAAACA TCTATATTGA TGGCCTTACC ACCCTGGACA AGGGCGAAGA TCAGTGGAAA 
AAGTGGCTTG AGGCACATCA GTAA 

 

Protein sequence

MIKRQKLIGF AAIAAFFLLL SCKNNLLTKT EKEKSGEIPV KNIILSPNKS EFSLEKNTAQ 
TITVKIIPEK ATNKALIYSS KHGDIASIDN TGLITAKKEG RTIITIEASN GVKKTIDVIV 
TPEPIPVTNI EFEEEPPAFL FIGDVYIFKA KAKPDEATNR KLEYTTMTSD VISVTNTELG 
TMKATKEGNA AITIRSASTP SVAKTVTIEI KKKPQIKYEE KQAVMPESAA GTYTFEVQTI 
DGKLDYEPYF TSSTLPWITG APTISSRTDP NKDVISFTCL KNKTVWNRRA YIKFKDKKTG 
QYIKGADGKA DLTVNIIQKK NENPVVHYKW VDGIGAPTEN QKIKMKIKNN GIETEDYFTD 
PFVFKWKETA DTKFYNVRKL DKLYVQGQFP SNYFVINGIR NEQIQGRDIS QCWAKTASNM 
LHWWFEQNKD YIEQYKQKAA IEEWKRPLYK HDYIRGLQDE DEGKKSNIAN IFRAYSHNNA 
RGGYIEDGLT WYLYKRDGQK NLGSIYPGLF NDVFAHDTSP INIERCETKK EFEQLMNKTL 
DNKRAIGIFW QGSKGNRPYQ HAVTCWGAAY DEDNNIICLY IAESNLPEAV LYPFGVRYKG 
NIYEEAEKNR TYMFNYALSK PENIYIDGLT TLDKGEDQWK KWLEAHQ