Gene Dtox_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3488 
Symbol 
ID8430483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3685312 
End bp3686598 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content51% 
IMG OID645035712 
ProductIg domain protein group 2 domain protein 
Protein accessionYP_003192830 
Protein GI258516608 
COG category[N] Cell motility 
COG ID[COG5492] Bacterial surface proteins containing Ig-like domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTGA GATGGTTGGA GTTTAAATTC CGGTTGCGAA AAGCAGTTCT TCTTGGGCTG 
GTTCCGGCCG CATTGCTTAG CCTGTTGTAC ATTGCCGGGC CGGGTATGGC CAGTACAGGC
TGTGGCACCG GTATACAAGG AGTGCCGTCT GATACGCTTG TGATTAAGGT TGGTTATTTT
GGCGGGCCTT ACTATACAAA GAAGGTTTAT ACTCTTAGTG ATTTTGATCA GCTTTCACAG
GTAAAACAGG CTTATACTTT TATTGACAGC ATGCCGTCTG TGTGTATGGA TGCGGCCACC
GGAGTCAGGT TGACAGACTT GCTGGCGGAT GCCGGTATTG ATGTCAATTC TGTGCAAAAA
TTTTATTTTT ATGCCACCGA TATAAGAAAG GGCTGGTATC AATGTTTAGA TAAGTCCTAC
CTGCTGGATA CCCCCCGTTA TTATTATCCT AATCTGCCTG CGGGCTGGGA CTATGAAAAG
GGTTCTTCTA CACTTGAAGC AGTTTACGGG GCGATCCGTG TAGATCCTAT TATTGCGTAC
AAGGATAACT GGCAGCGTTA TGGCGAAGTT CCGGATTTCA GCGTTTACGA CACTTCAACC
AGGTTCAGGC TGCTGTTTGG TCAGAAGGAG CCTGATGAAT GTACCGCTCC GCAGTCTGCC
AAATGGGTGC ATTCCATCGA TGTGATGTTG GGGGGCATGC CTCCTGCCGG AGTTACTCTG
GATCAGAATG CAGTCAATCT TAAAGTAGGC AGTACGGTAC GGTTGACGGC TACCGTGGCC
CCGTATGAAG CTACGGACAA GAGCGTGACC TGGAGTTCCA GCGATCCCGG TGTGGCCACA
GTGGATCACA ACGGTCTGGT GACAGTTGTG GGTCCGGGCG CGGCTACCAT TGCAGTCAGT
ACTGTAGTGG GTAATTTAAC GGCAACATGT ATCGTAAACG GTCCCAGGGA GACCGGGCCC
GGTCAAAGTT CTGAGCCTTT CGGCGCCGGT CCTCAAAAGA ACGGAGAAGT TGATAATCCG
TTCGGGTTGC CGGTGTCTGA AGACAACCGG CAACACCTGG CGAAAAAGGA GATCACAGCC
GCTGTTTCCA CAGCTGCCCC TGCCGCTTCC GAACAGTCGG GCAGCCAGCC CTGGCGCGTA
TATGAGATGT CATCTGATGC TGTGCCTTTG CAGCAGCAGA AGCGGCAAAA TACACTGGAT
ATTTTTGCGG CAGTATTGCT TGGTGTCTTA TTGCTTGGGG GGTCAGGTAA AAGATACATG
GAACATATAA GGGAGGTTGT TAGGTGA
 
Protein sequence
MRLRWLEFKF RLRKAVLLGL VPAALLSLLY IAGPGMASTG CGTGIQGVPS DTLVIKVGYF 
GGPYYTKKVY TLSDFDQLSQ VKQAYTFIDS MPSVCMDAAT GVRLTDLLAD AGIDVNSVQK
FYFYATDIRK GWYQCLDKSY LLDTPRYYYP NLPAGWDYEK GSSTLEAVYG AIRVDPIIAY
KDNWQRYGEV PDFSVYDTST RFRLLFGQKE PDECTAPQSA KWVHSIDVML GGMPPAGVTL
DQNAVNLKVG STVRLTATVA PYEATDKSVT WSSSDPGVAT VDHNGLVTVV GPGAATIAVS
TVVGNLTATC IVNGPRETGP GQSSEPFGAG PQKNGEVDNP FGLPVSEDNR QHLAKKEITA
AVSTAAPAAS EQSGSQPWRV YEMSSDAVPL QQQKRQNTLD IFAAVLLGVL LLGGSGKRYM
EHIREVVR