| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0886 |
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| Symbol | |
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| ID | 4172015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1047358 |
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| End bp | 1049106 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053887 |
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| Product | Ig-like, group 2 |
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| Protein accession | YP_660466 |
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| Protein GI | 109897211 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.226822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC ACTTACTAGT AAACAAAGTA ACAGCAGCCG TGCTTGCCAC GCTTTTAGCC
GGCTGTGGCG GCGGTACTGA CGAAGGGTAC GACCCTGATT TTTCAGCGTC TGAGATTGTG
ACCTTTGATA CGGCGACGCT TAACGCGTCT TTTGAAGAAG AAACCGGTAC CCAAGAAGTT
GATTTACTGG CTGGGGCCAT GGCTGATGGC AAACCACTGG CCGGCAATAT CAATGTTTCA
GACTTTAACT TCACCGTTGA TCAAAACTTT GTCACGCCAC AAATAAGAGG TAATGGTTTA
GCCAATCAGA CCGTGTCACC TTTTTCTGAA CAAGACGGCA AGCTCATCAT TGATACTGAC
AAATTTGCTG ACCGTCTCAG CACCTGTGAC ACCACTGATA TCATTGGAGG CCCGCGGGAT
GAGGATGACA ATCCAACACC TGACGGCTTC TTAGATACCC CGCCCCAAGT GACTTATACA
ATCGATTTTG CAGTGGATAA CGGCTTTGAT TTAGCCCCCG GGGAAGTATT GCCCAGACGC
ACTTTAATAT TGACCATGAA TGCAGTGTTC GACGCTGTTG AAAGTGTGAC GGCTGAGCCA
ATTCGCGTAT TGATGGGCCA AGAAGCCACT CTTTTTGCCA CTGTGCTTCC TGAAAAAGCA
TGCGATCAGG GCCTAACTTA TTCGATAGCC GACCCGTCCA TCGCGAGCAT AGATGACAAC
GGCAATATCA CTACCATTGA GGCTGGGCAA ACCACGGTAA CAGTGACCAG CGTCAGTGCG
CCTGATAAGT CAATTACAGT AGACCTAGAA GTCTTTTCTG AATTCACCTT AGCAATTTCC
AACAGAGACA TGGACAGCAA TGGGCTGCCA AGTGAAACGA AAGAGGTACC CGCCTGCGTA
ACCGCAGGAT TTAACGTTAC CCCTACCCCA GCGTTTGGAG ACACCTTAAG CGGTGATTAT
GCCTACGCGT GGACCTCAAG CAACGACGTA GACTTCCCTG CTACATCTGT TAACTATGGC
GAAAGTGGTG TTGGCATGTA CTCAGTGGGT GACGCCTCAA CCGTTGGCTT TACGTTTGAT
GCATCCGTTT CTTTAGCGTC TGGCGATACC GGAGCAACCG CTTTTGCCGA TGTGATGAGT
CAAGATATTA CCGCGACTGT GGTCAGAAAC CTGATGTGCG AAACCGGCGT ATCAGCTCAC
CCTGCTGGAT TCAACACTGA CTTTAATCTC GACGGTGCAG GCGCTCCTTG GAAAGGCGGC
ACTGTTGCTG CTTCTGACGT CAGTCTTTCG GGCAAAGCCT TGGAAATTAC TGCTGGCGCC
GATGAGGCAA CAAAAGTCCT CCAGCAAGTG TTCAACAAAC AACGGAATTG GCACAGTGCA
ACCTATGGCT TAGGCGGAAG CTCTATCGGC CAGACCTACA AATATTCAGT CTGGGTAAAA
CTACCGGAGC TACCAACACA AGACATCACC CTTAAACATG TCCTGTTAGC GTGGACATAT
GACGGCGGCC CAAGTGGCCC GGGCTTTGAT TTTAGAAGAC CTACAGCCGG TATTTTGTCC
GCGACACTGC AGAAAACCAC CGAATGGCAA TTGGTCGAGT TTATCAATGA AGCAACTGGC
GATAGAGAAT GGTCCGTGCC ACCCCAGTGG AATGTCTCCA CCGATGTATT CCAATTTTGG
GAAGTGTATG GCCTACCAGA AGGCGAGAAA ATCCTACTTG ACGAATACGC AGTCATGCCA
GTGCAATAA
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| Protein sequence | MKKHLLVNKV TAAVLATLLA GCGGGTDEGY DPDFSASEIV TFDTATLNAS FEEETGTQEV
DLLAGAMADG KPLAGNINVS DFNFTVDQNF VTPQIRGNGL ANQTVSPFSE QDGKLIIDTD
KFADRLSTCD TTDIIGGPRD EDDNPTPDGF LDTPPQVTYT IDFAVDNGFD LAPGEVLPRR
TLILTMNAVF DAVESVTAEP IRVLMGQEAT LFATVLPEKA CDQGLTYSIA DPSIASIDDN
GNITTIEAGQ TTVTVTSVSA PDKSITVDLE VFSEFTLAIS NRDMDSNGLP SETKEVPACV
TAGFNVTPTP AFGDTLSGDY AYAWTSSNDV DFPATSVNYG ESGVGMYSVG DASTVGFTFD
ASVSLASGDT GATAFADVMS QDITATVVRN LMCETGVSAH PAGFNTDFNL DGAGAPWKGG
TVAASDVSLS GKALEITAGA DEATKVLQQV FNKQRNWHSA TYGLGGSSIG QTYKYSVWVK
LPELPTQDIT LKHVLLAWTY DGGPSGPGFD FRRPTAGILS ATLQKTTEWQ LVEFINEATG
DREWSVPPQW NVSTDVFQFW EVYGLPEGEK ILLDEYAVMP VQ
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