9 homologs were found in PanDaTox collection
for query gene PSPTO_0411 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_0411  hypothetical protein  100 
 
 		 248 aa  488  1e-137  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_4765  hypothetical protein  89.07 
 
 		 248 aa  410  1e-113  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.160145 
 
 
-
 
NC_007492  Pfl01_5209  hypothetical protein  56.12 
 
 		 236 aa  211  1e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.0250136 
 
 
-
 
NC_009439  Pmen_2245  TraX family protein  42.37 
 
 		 233 aa  165  6.9999999999999995e-40  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.0036166  normal  1 
 
 
-
 
NC_010501  PputW619_5167  TraX family protein  41.74 
 
 		 243 aa  151  8.999999999999999e-36  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_05830  TraX domain-containing membrane protein  49.14 
 
 		 246 aa  146  4.0000000000000006e-34  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_2699  TraX family protein  38.79 
 
 		 233 aa  133  3e-30  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012034  Athe_2346  TraX family protein  29.29 
 
 		 225 aa  54.3  0.000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013171  Apre_1445  hypothetical protein  30.63 
 
 		 238 aa  43.9  0.003  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>