Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5167 |
Symbol | |
ID | 6114169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5726601 |
End bp | 5727332 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641624991 |
Product | TraX family protein |
Protein accession | YP_001752012 |
Protein GI | 170724324 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGTCAG ATCCCATCCG TCACAGAGAG CGGCACACGG GCCAGGACCT GATCAAGTGG ATCGCCTTGA TTACGATGGT GCTCGATCAC ATGCGGTTGG CCTGGCCGGC TACCAGTAAC CTGTTTGTCT TAGGCCGACT GTCCTTTCCT TTGTTCTGTT TGGCGGTGGC CATCAACGTT TCGCGGAACC AGCCTGGTGA GTTGTTTATC CGGAGTAATG GCCGGTATCT CGCCCTTTTG GTGTTGTTTG CGGCGCTATC AGAAGTGCCA TACCGGATGG TCAGCACCTC AGGCACATTC AACGTCCTGG TCACGTTGGC GTTGGGTCTG CTGGTCGCTT GGGGAGTGCA GCACCGGACG CTCGAAAGCC TGGTACTGGC CGGCGGGGCG ATTCTGGCTG CCTATTTGCT GAGCGAGCCG TTGATGTTCG GCTTTTATGG AGTGTTCGTG CCGGCAGCTC TGGTGCTCGC GATCAAGCGC CCCGAACTTT TCGCGTTACT GCCCGTCGCA CTCTGTGCTG CTGCCAACTC TCGAACTGGC CTGTTCGAGC AAGCAGCGCA ACTAGAACCA TTCGCCATCC TCGCACTGTC GACCGCCGCT CTTGCACCTC TGCTCGGTTT GGCGCTGTTC TGGGCCCCAT TGCCGTTCAA GGTCGTGCCT GTCAAACAGT GGAGCTATTG GTTCTACCCC GGCCACCTGG TGGCGCTACT GGGTATTCGC AACTTGCTTT AG
|
Protein sequence | MTSDPIRHRE RHTGQDLIKW IALITMVLDH MRLAWPATSN LFVLGRLSFP LFCLAVAINV SRNQPGELFI RSNGRYLALL VLFAALSEVP YRMVSTSGTF NVLVTLALGL LVAWGVQHRT LESLVLAGGA ILAAYLLSEP LMFGFYGVFV PAALVLAIKR PELFALLPVA LCAAANSRTG LFEQAAQLEP FAILALSTAA LAPLLGLALF WAPLPFKVVP VKQWSYWFYP GHLVALLGIR NLL
|
| |