Gene PSPTO_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0411 
Symbol 
ID1182020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp457946 
End bp458692 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID637391779 
Producthypothetical protein 
Protein accessionNP_790260 
Protein GI28867641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTT CCAACCCGCC TTTTCTGCCC GGACGCAACA AGGCGCTGGA CCTGCTCAAG 
TGGCTGGCGA TGCTGAGCAT GGTGCTCGAT CATCTGCGCT ACGTGGGTTG GTCGATTGAT 
TTTCTGTACG TGCCAGGGCG TTTCGCCTTT CCCTGGTTCT GTCTGGCGAT TGCGGTAAAC 
CTGTCACGGC GCAGCGCAGC CCTTGTGGCC CCGCGTGTGC AATGGCGGTA TCTGGGCTGG 
TTGTTGGCGT TCGCCGCGTT ATCGGAGATT CCGTATCGAC TGTTCATGGC GGATGCGACC 
GTGCTGAACG TGATGCCGAC CCTGTTACTG GGGCTGTTGA TTGCTCAGGG CTGGCAGCAT 
CGCAATGTAA CGACCCGTGT CATGGCCATC GTCGCACTGC TGCTGGCAGC GGTTTTTCAG 
CAGCACTTGA TGTTTGGCTT CGCCGGCGTG CTGTTGCCGC TGGTCTTTGT GCTGGTGCTG 
CAAAAACGGC TTTGGTATGC AGCGTTCCCG GCTGTTTTTT GTCTGGCGGG GAACGCCTGG 
TCACAGATGT TCGCCGGTGC GGCCTGGGGC GATCCAGTTT CCGTAGGTTC GATAATTGCC 
TGTGCGCTGG CGCCAGTGCT GGGCATCGCG TTGCTGCGGA CAAAGCCTGA GTTCTCAGTG 
ATCCCGATGC GGCGTTGGGC CTACGCGATC TACCCGCTGC ATTTCCTTGT GTTGCTGGGG 
GTGCGGGTGG TGTTGGAGCG GGTGTGA
 
Protein sequence
MDLSNPPFLP GRNKALDLLK WLAMLSMVLD HLRYVGWSID FLYVPGRFAF PWFCLAIAVN 
LSRRSAALVA PRVQWRYLGW LLAFAALSEI PYRLFMADAT VLNVMPTLLL GLLIAQGWQH 
RNVTTRVMAI VALLLAAVFQ QHLMFGFAGV LLPLVFVLVL QKRLWYAAFP AVFCLAGNAW 
SQMFAGAAWG DPVSVGSIIA CALAPVLGIA LLRTKPEFSV IPMRRWAYAI YPLHFLVLLG 
VRVVLERV