13 homologs were found in PanDaTox collection
for query gene PP_4504 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_4504  hypothetical protein  100 
 
 		 138 aa  278  1e-74  Pseudomonas putida KT2440  Bacteria  normal  0.214225  normal  1 
 
 
-
 
NC_009512  Pput_1407  protein of unknown function, Spy-related  99.28 
 
 		 138 aa  276  7e-74  Pseudomonas putida F1  Bacteria  normal  0.0117564  normal  0.971438 
 
 
-
 
NC_010322  PputGB1_4010  protein of unknown function Spy-related  94.93 
 
 		 138 aa  265  2e-70  Pseudomonas putida GB-1  Bacteria  normal  0.497545  hitchhiker  0.0000098049 
 
 
-
 
NC_010501  PputW619_3793  hypothetical protein  85.51 
 
 		 138 aa  239  7e-63  Pseudomonas putida W619  Bacteria  normal  1  decreased coverage  0.000000000194694 
 
 
-
 
NC_007492  Pfl01_1482  hypothetical protein  61.74 
 
 		 149 aa  171  3.9999999999999995e-42  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0109607  normal  0.0630119 
 
 
-
 
NC_008463  PA14_22740  hypothetical protein  58.62 
 
 		 146 aa  155  2e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.443318  normal  0.0477687 
 
 
-
 
NC_009656  PSPA7_1921  hypothetical protein  58.62 
 
 		 146 aa  155  2e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126651  n/a   
 
 
-
 
NC_007005  Psyr_3590  hypothetical protein  52.32 
 
 		 161 aa  134  6.0000000000000005e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0505137  normal  0.693869 
 
 
-
 
NC_004578  PSPTO_1805  hypothetical protein  51.37 
 
 		 154 aa  127  6e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.656066  n/a   
 
 
-
 
NC_009439  Pmen_1830  protein of unknown function, Spy-related  52.89 
 
 		 137 aa  115  3e-25  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.501634 
 
 
-
 
NC_012560  Avin_15600  hypothetical protein  45.08 
 
 		 149 aa  94  7e-19  Azotobacter vinelandii DJ  Bacteria  normal  0.0450221  n/a   
 
 
-
 
NC_008255  CHU_1833  hypothetical protein  33.8 
 
 		 160 aa  42.7  0.002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.498912  normal  0.0419171 
 
 
-
 
NC_010506  Swoo_3964  hypothetical protein  21.21 
 
 		 141 aa  41.2  0.005  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
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