Gene Pmen_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1830 
Symbol 
ID5109960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2019422 
End bp2019835 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content61% 
IMG OID640503062 
Productprotein of unknown function, Spy-related 
Protein accessionYP_001187326 
Protein GI146306861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.501634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA CCCTCACCGC CCTGCTGCTC GCCGCCACCC TGCCGACCCT GGCCTTCGCC 
ATGCCGATGA AAGACGGCGG CCCGCGCCAT CATGATCGCG ACCACGGCAT GTTCAAGGAG
CTCAACCTGA GCAAGGAGCA GCGTCAGGAA TTTCGCAAGC TGATGGGCGA GCAGATGAAG
ACCCATCGTG AAATCACCAA GCGCTACCTG GACAAGCTGC CGGAAGCCGA GAAACAGGCC
ATGAAGCAGG AGCTGGACAA GGCACGCGCC GACCAGCACA AGGCGCTGCG TGATCTGCTC
AACCCCGAGC AGCAGAAGGC CTTCGACGAG CACCAGAAGA AGATGGAGGC TCGCCGTGCC
GAAATGGCCG AGTTCAAGGC CTGGAAAGCC GAGAAGGACC AGAAGACCAA CTGA
 
Protein sequence
MRKTLTALLL AATLPTLAFA MPMKDGGPRH HDRDHGMFKE LNLSKEQRQE FRKLMGEQMK 
THREITKRYL DKLPEAEKQA MKQELDKARA DQHKALRDLL NPEQQKAFDE HQKKMEARRA
EMAEFKAWKA EKDQKTN