12 homologs were found in PanDaTox collection
for query gene Psyr_3590 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007005  Psyr_3590  hypothetical protein  100 
 
 		 161 aa  319  9.999999999999999e-87  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0505137  normal  0.693869 
 
 
-
 
NC_004578  PSPTO_1805  hypothetical protein  85.23 
 
 		 154 aa  194  4.0000000000000005e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.656066  n/a   
 
 
-
 
NC_007492  Pfl01_1482  hypothetical protein  58.06 
 
 		 149 aa  160  6e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0109607  normal  0.0630119 
 
 
-
 
NC_010501  PputW619_3793  hypothetical protein  55.62 
 
 		 138 aa  159  1e-38  Pseudomonas putida W619  Bacteria  normal  1  decreased coverage  0.000000000194694 
 
 
-
 
NC_010322  PputGB1_4010  protein of unknown function Spy-related  54.72 
 
 		 138 aa  157  7e-38  Pseudomonas putida GB-1  Bacteria  normal  0.497545  hitchhiker  0.0000098049 
 
 
-
 
NC_009512  Pput_1407  protein of unknown function, Spy-related  54.72 
 
 		 138 aa  154  4e-37  Pseudomonas putida F1  Bacteria  normal  0.0117564  normal  0.971438 
 
 
-
 
NC_002947  PP_4504  hypothetical protein  54.09 
 
 		 138 aa  153  1e-36  Pseudomonas putida KT2440  Bacteria  normal  0.214225  normal  1 
 
 
-
 
NC_008463  PA14_22740  hypothetical protein  53.85 
 
 		 146 aa  145  2.0000000000000003e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.443318  normal  0.0477687 
 
 
-
 
NC_009656  PSPA7_1921  hypothetical protein  53.85 
 
 		 146 aa  145  2.0000000000000003e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126651  n/a   
 
 
-
 
NC_009439  Pmen_1830  protein of unknown function, Spy-related  45.04 
 
 		 137 aa  95.5  3e-19  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.501634 
 
 
-
 
NC_012560  Avin_15600  hypothetical protein  46.55 
 
 		 149 aa  92.8  2e-18  Azotobacter vinelandii DJ  Bacteria  normal  0.0450221  n/a   
 
 
-
 
NC_009832  Spro_4741  periplasmic protein  31.53 
 
 		 166 aa  45.8  0.0003  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>