Gene Psyr_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3590 
Symbol 
ID3369121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4271541 
End bp4272026 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID637653945 
Producthypothetical protein 
Protein accessionYP_236660 
Protein GI66046819 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0505137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.693869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA CCCTGATCGC TTTGATGTTT GCCACTGCCC TGCCGACCAT TGCCATGGCT 
GCACCACCAG CACCACCTGC CGGTGGCCCG GATGCTGACG GACCTGCCAT GCACATGGAT
CGCGATGACC GCGGCCCAGG CCCTGGCCCA CGTATGGATC GCGGCCCTGG CCCGATGGGA
CCGATGGCTG AGCTGGACCT GACACGTGAA CAGCGTCAGC AGATCGAACG CCTGATGCGC
GAGCAAAAGC ATGAGCGCCG CGAAATCACT CAAAGCTACC TGGAAAAAAT GCCTGCTGCC
GACCAGAAAG CAATGCACGA CGAAATCGAA GCCAAACGCT CCAAGACCGA CAGCGAAGTT
CGTGCACTGC TGAGGCCTGA CCAGCAGAAG CTGTTTGACG AAATCAAGAA GAAAGAAGAT
GAGCGTCGCG CCGAATGGGC CGAGTTCAAG GCCTGGAAAG CGGCAAAAGC AGCAAAAACG
CTGTAA
 
Protein sequence
MRKTLIALMF ATALPTIAMA APPAPPAGGP DADGPAMHMD RDDRGPGPGP RMDRGPGPMG 
PMAELDLTRE QRQQIERLMR EQKHERREIT QSYLEKMPAA DQKAMHDEIE AKRSKTDSEV
RALLRPDQQK LFDEIKKKED ERRAEWAEFK AWKAAKAAKT L