Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3590 |
Symbol | |
ID | 3369121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4271541 |
End bp | 4272026 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653945 |
Product | hypothetical protein |
Protein accession | YP_236660 |
Protein GI | 66046819 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0505137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.693869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA CCCTGATCGC TTTGATGTTT GCCACTGCCC TGCCGACCAT TGCCATGGCT GCACCACCAG CACCACCTGC CGGTGGCCCG GATGCTGACG GACCTGCCAT GCACATGGAT CGCGATGACC GCGGCCCAGG CCCTGGCCCA CGTATGGATC GCGGCCCTGG CCCGATGGGA CCGATGGCTG AGCTGGACCT GACACGTGAA CAGCGTCAGC AGATCGAACG CCTGATGCGC GAGCAAAAGC ATGAGCGCCG CGAAATCACT CAAAGCTACC TGGAAAAAAT GCCTGCTGCC GACCAGAAAG CAATGCACGA CGAAATCGAA GCCAAACGCT CCAAGACCGA CAGCGAAGTT CGTGCACTGC TGAGGCCTGA CCAGCAGAAG CTGTTTGACG AAATCAAGAA GAAAGAAGAT GAGCGTCGCG CCGAATGGGC CGAGTTCAAG GCCTGGAAAG CGGCAAAAGC AGCAAAAACG CTGTAA
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Protein sequence | MRKTLIALMF ATALPTIAMA APPAPPAGGP DADGPAMHMD RDDRGPGPGP RMDRGPGPMG PMAELDLTRE QRQQIERLMR EQKHERREIT QSYLEKMPAA DQKAMHDEIE AKRSKTDSEV RALLRPDQQK LFDEIKKKED ERRAEWAEFK AWKAAKAAKT L
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