Gene CHU_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1833 
Symbol 
ID4183877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2151889 
End bp2152371 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content42% 
IMG OID638071832 
Producthypothetical protein 
Protein accessionYP_678442 
Protein GI110638233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.498912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0419171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCGTTTTCTC AATCGTTTTC TTCTCAAGTT TATGCCTTGT ATCTTTTGCA 
CAGCAAAACC ATAACGGCAA CCAGGGACAA CATAATGGCC AGCAAGGTGG TAAAGCTGCT
CATGGCGGCG GGCAGGGTCA AAAACAAACG TCAGCTCAAA AAGCAGCCAG GCTGACTCAA
TATATGACAA GCTCGTTAAA TTTAAGTGCC GAACAGCAAA GCAAAGTAGC TGCGCTGAAT
ACATCCAAGG CACAGCAGGT CGACAGTATC CGTTCAAAAT ACAAAGGTAA TATGGAAGCT
GCAAAACCTG AATTAAAAAC AGCCCGCGAT ACCTATAACG CCAGCCTGAA TACAATTTTA
ACAGCCGACC AGAAAAAAAA ATGGGACGAA ATTAAAAAGC AAAAAAAAGA GGAATTTCAA
AAAAACAGAG CTGCCGGAAC AAAACCGGCC GAAGGCGAAA TTACTCCGGA AGACTTAGAC
TAA
 
Protein sequence
MKKIVFSIVF FSSLCLVSFA QQNHNGNQGQ HNGQQGGKAA HGGGQGQKQT SAQKAARLTQ 
YMTSSLNLSA EQQSKVAALN TSKAQQVDSI RSKYKGNMEA AKPELKTARD TYNASLNTIL
TADQKKKWDE IKKQKKEEFQ KNRAAGTKPA EGEITPEDLD