Gene Pput_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1407 
Symbol 
ID5195422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1576660 
End bp1577076 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content61% 
IMG OID640585872 
Productprotein of unknown function, Spy-related 
Protein accessionYP_001266749 
Protein GI148546647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0117564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.971438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA CCCTTATCGC CCTGATGTTC GCTGCCGCTT TGCCTACCGT AGCCATGGCC 
ATGCCTGACG GCGGCCCGCG CCACGACGGC CCGCATCATC GCGGTGATGC GCCTTTCCAC
CAACTGGACC TGAGCCGCGA TCAGCGCCAG CAGATCGGCA AGCTGATGGG CGAGCAAATG
CAGCAGCGCC GCGACATTAC CGAGCGCTAC CTGTCCAAGC TGCCGGCCGC CGACCAGAAA
GCCATGAAGG ATGAACTGCA AGCCAACCGC GACAAGACCG ACAGCGCAGT GCGCAAGTTG
CTCACGGCTG ACCAGCAGAA GAAGTTTGAC GAACTGCAAA AAGAACGCGC CGCCAAGAAA
GCCGAGTGGC AGGAGTTCCA GGCCTGGAAA GCTGAAAAAG GCGCCAAGGC CCAGTAA
 
Protein sequence
MRKTLIALMF AAALPTVAMA MPDGGPRHDG PHHRGDAPFH QLDLSRDQRQ QIGKLMGEQM 
QQRRDITERY LSKLPAADQK AMKDELQANR DKTDSAVRKL LTADQQKKFD ELQKERAAKK
AEWQEFQAWK AEKGAKAQ