10 homologs were found in PanDaTox collection
for query gene PP_2343 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2343  hypothetical protein  100 
 
 
243 aa  502  1e-141  Pseudomonas putida KT2440  Bacteria  normal  0.194431  hitchhiker  0.0000304739 
 
 
-
 
NC_011138  MADE_03110  Zeta toxin  44.81 
 
 
239 aa  216  2.9999999999999998e-55  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.562718  n/a   
 
 
-
 
NC_007492  Pfl01_1333  zeta toxin  45.83 
 
 
252 aa  199  1.9999999999999998e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1822  zeta toxin family protein  42.37 
 
 
238 aa  182  5.0000000000000004e-45  Shewanella sp. ANA-3  Bacteria  normal  0.603428  normal  0.0303924 
 
 
-
 
NC_009512  Pput_4151  zeta toxin family protein  41.91 
 
 
241 aa  181  7e-45  Pseudomonas putida F1  Bacteria  normal  normal  0.0420722 
 
 
-
 
NC_008321  Shewmr4_1712  zeta toxin family protein  40.25 
 
 
238 aa  174  9.999999999999999e-43  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00964681 
 
 
-
 
NC_013421  Pecwa_2993  Zeta toxin family protein  32.94 
 
 
235 aa  82.4  0.000000000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008545  Bcen2424_6819  zeta toxin family protein  30.48 
 
 
659 aa  52  0.000008  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4262  putative zeta toxin  23.98 
 
 
308 aa  43.1  0.004  Escherichia coli HS  Bacteria  normal  0.484373  n/a   
 
 
-
 
NC_009801  EcE24377A_4571  putative zeta toxin  23.98 
 
 
308 aa  43.1  0.004  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
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