Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2343 |
Symbol | |
ID | 1045342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2674015 |
End bp | 2674746 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637145766 |
Product | hypothetical protein |
Protein accession | NP_744492 |
Protein GI | 26989067 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.194431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000304739 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCAAG AAGAACAGGA AATTTCTAGC CGCGCTCTGC AGTTCGCAAA AGAGAATCGT ACACGCATCG CTCGTGAACT GACTTGCATT GAAACCTATC CGGCGGATGA ATACCCGGTG TCAGTTTTTA TGGCAGGATC TCCTGGCGCT GGGAAAACCG AGGTTTCAAG AGCTTTTATC GGTTACATGC AGTCCACAGG ATCTAGTGCG CTACGTATCG ATCCTGACGA TTTCAGGGAG TATTTTCCCG ACTACAACGG GAAAAATTCC AGCCTTTTCC AGCGTGGGGT AACCACGTTT GTGGAGAGAA CCCTGGATCT GGTGTACAAG CAGCGGCAGT CTTTTCTCTT GGATGGCACC CTCGCCAACC TTGATGTCGG AAGAAGAAAC ATCGCTCGCG CGCTTGAAAA AGTGAACAGG TCGGCCCAGG TTATCTACGT GTACCAGCGA CCTGAGCTGG CTTGGGAGTT TGTTCTGGCG AGAGAGAAGA AGGACGGAAG GAACATCCCG TGCTCGGAAT TTGTAAGACA GTTTTACGCG GCCAAGGTGT CGGTATGTGC ACTAAAACGT GAATTTGATG GCAGGCTGCA GGTAGATGTG ATCATCAAGG ATAACGATGG CAGCAACAGT GACATCGGTA TCGACCTTTC AGCTGACGAA ATTGACGCAT TTGTCAACCA GCCCTATGAT CACCATGAGC TTGAGCGTGT TTTGAACGGA GAGTCCCAAT GA
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Protein sequence | MTQEEQEISS RALQFAKENR TRIARELTCI ETYPADEYPV SVFMAGSPGA GKTEVSRAFI GYMQSTGSSA LRIDPDDFRE YFPDYNGKNS SLFQRGVTTF VERTLDLVYK QRQSFLLDGT LANLDVGRRN IARALEKVNR SAQVIYVYQR PELAWEFVLA REKKDGRNIP CSEFVRQFYA AKVSVCALKR EFDGRLQVDV IIKDNDGSNS DIGIDLSADE IDAFVNQPYD HHELERVLNG ESQ
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