Gene Shewana3_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1822 
Symbol 
ID4477882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2155072 
End bp2155788 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content44% 
IMG OID639726406 
Productzeta toxin family protein 
Protein accessionYP_869461 
Protein GI117920269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.603428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0303924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC AACAGATCAC TGAGAAAGCT ACCAAAGAAG CCAAGAAAAT GAAAAAAGCG 
GTGGCCAACA GGTTAGTTGA TCATTTACCG CAGGAGGAAT CTCCGGTATC TGTTTTTATG
GCAGGCTCCC CTGGTGCAGG TAAAACAGAA ACGGCCCGTG CGATGATCCG CGCATTTGCT
AATGAGCATG GTCAAGGCTT GGTGCATATT GAAAACGATG AACTGAGAAA AGAGTTTGAA
GATTATAACG GCTTGAATTC GCCGTTGTTT CAGCGCCCGG CTACACTTTT AGTGGAAGCT
ATACACGACA AGGCACTGAA GAACGGTGTT AGTTTTATCT TAGACTCGAC ACTGTCGAGT
TTTGACAAAG CAAAAGATAA CATTGAGCGT TCATTGAAGA AAAATCGCTT TGTGATGGTG
ATCTTTGTGT ACCAAGCGCC TGAGCAAGCA TGGCAGTTGG TCAAGGCGAG AGAGAAGGTA
GAAGGTCGTC GTGTGCCAGA GTCTGTGTTC GTTGAGCAAT TTTTGGAGTC ACAACGAGTG
GTGAGTGAAC TTAAACGCCA TTTTAAAGAC AAAATTAATA TTACGTTCAT CGAAAAAAAC
ATTGACGGTG ACAACGATAA CCCCCACTTT AATGTGACTG ACATTGACGC GTTATTGCGC
AAAAAGTACA ATCGCCAGTC CTTAGAAGCC ATCGTTGGCC TAAATCCAGT TACATAA
 
Protein sequence
MDDQQITEKA TKEAKKMKKA VANRLVDHLP QEESPVSVFM AGSPGAGKTE TARAMIRAFA 
NEHGQGLVHI ENDELRKEFE DYNGLNSPLF QRPATLLVEA IHDKALKNGV SFILDSTLSS
FDKAKDNIER SLKKNRFVMV IFVYQAPEQA WQLVKAREKV EGRRVPESVF VEQFLESQRV
VSELKRHFKD KINITFIEKN IDGDNDNPHF NVTDIDALLR KKYNRQSLEA IVGLNPVT