Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1822 |
Symbol | |
ID | 4477882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2155072 |
End bp | 2155788 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639726406 |
Product | zeta toxin family protein |
Protein accession | YP_869461 |
Protein GI | 117920269 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.603428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0303924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGATC AACAGATCAC TGAGAAAGCT ACCAAAGAAG CCAAGAAAAT GAAAAAAGCG GTGGCCAACA GGTTAGTTGA TCATTTACCG CAGGAGGAAT CTCCGGTATC TGTTTTTATG GCAGGCTCCC CTGGTGCAGG TAAAACAGAA ACGGCCCGTG CGATGATCCG CGCATTTGCT AATGAGCATG GTCAAGGCTT GGTGCATATT GAAAACGATG AACTGAGAAA AGAGTTTGAA GATTATAACG GCTTGAATTC GCCGTTGTTT CAGCGCCCGG CTACACTTTT AGTGGAAGCT ATACACGACA AGGCACTGAA GAACGGTGTT AGTTTTATCT TAGACTCGAC ACTGTCGAGT TTTGACAAAG CAAAAGATAA CATTGAGCGT TCATTGAAGA AAAATCGCTT TGTGATGGTG ATCTTTGTGT ACCAAGCGCC TGAGCAAGCA TGGCAGTTGG TCAAGGCGAG AGAGAAGGTA GAAGGTCGTC GTGTGCCAGA GTCTGTGTTC GTTGAGCAAT TTTTGGAGTC ACAACGAGTG GTGAGTGAAC TTAAACGCCA TTTTAAAGAC AAAATTAATA TTACGTTCAT CGAAAAAAAC ATTGACGGTG ACAACGATAA CCCCCACTTT AATGTGACTG ACATTGACGC GTTATTGCGC AAAAAGTACA ATCGCCAGTC CTTAGAAGCC ATCGTTGGCC TAAATCCAGT TACATAA
|
Protein sequence | MDDQQITEKA TKEAKKMKKA VANRLVDHLP QEESPVSVFM AGSPGAGKTE TARAMIRAFA NEHGQGLVHI ENDELRKEFE DYNGLNSPLF QRPATLLVEA IHDKALKNGV SFILDSTLSS FDKAKDNIER SLKKNRFVMV IFVYQAPEQA WQLVKAREKV EGRRVPESVF VEQFLESQRV VSELKRHFKD KINITFIEKN IDGDNDNPHF NVTDIDALLR KKYNRQSLEA IVGLNPVT
|
| |