Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2993 |
Symbol | |
ID | 8531399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3254630 |
End bp | 3255337 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | Zeta toxin family protein |
Protein accession | YP_003260346 |
Protein GI | 261822240 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGACA TAAAAATCTC TGCATTAGCG GAGGCTGTTG CTGAGGCGAT AAAGGATATT GTTTATAACG CGATAACTGC TGGCCTGATG AAATCGGTGA CCCCAGCAGT ATTTTTTACG GCAGGTTCTC CCGGTGCTGG CAAGTCTGAG ATGATTAACC AAAGGCTCCG CGTTTTTTCT AATATTCTGG TGATAGATGC TGATGAATTC CGTCGGCTAT TGCCTTACTA CGAAGGAACC AATGCGCCAC TCTTTCAGCG TGCAGCATCG AATCTTGTTG AATATGTCTA CATGAAAGCG ACAACTGAAG GCTTAGACAT CATCATGGAT TCAAATTTTG CGAGTTTTAA GAACGCTGAG TTCAATCTCT CTCTGGCTTT AGGTCGTGGT TATTTAACGG CTATCGATTA TGTCTATTTA GATCCTGCAC TTGCTTGGGC GTATGCCAGA CAGCGAAAGC GCAAGGTACC GTTGAGTGTA CTAAAGAATA ACTTCATGAA GTGTCGTTCG ACGATCAAGA AAGTGTTGAA GGATGAACGA TTTATAGGAA GGGTACAGGT AACGGTGTAT TACCGTGAAA AAGACTTTAC GCAGCCCAAT AAATTTAACG TTACTCGTAT CAGAAATATT AAAACAGAAA TCGAGTTTTT GAACTCGCAT CGTTGCCCTT ATACAAAACT TGCTCACCTT GGCGTTATTT CTGTATGA
|
Protein sequence | MDDIKISALA EAVAEAIKDI VYNAITAGLM KSVTPAVFFT AGSPGAGKSE MINQRLRVFS NILVIDADEF RRLLPYYEGT NAPLFQRAAS NLVEYVYMKA TTEGLDIIMD SNFASFKNAE FNLSLALGRG YLTAIDYVYL DPALAWAYAR QRKRKVPLSV LKNNFMKCRS TIKKVLKDER FIGRVQVTVY YREKDFTQPN KFNVTRIRNI KTEIEFLNSH RCPYTKLAHL GVISV
|
| |