Gene Pfl01_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1333 
Symbol 
ID3717332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1505301 
End bp1506059 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content50% 
IMG OID 
Productzeta toxin 
Protein accessionYP_347065 
Protein GI77457560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGAAG ACAAAAGGCT TGGAATGACG GATGAAGAAC AGGCCATCTG GGACGATGCG 
ATCAGGTTCG CACGATCAAA CAAGAAGGTT ATTGGCAAGC GACTCACGGA TCAGACCCGG
TATCCGCCCG AAAAAGAGCC TGTTTCAGTT TTCATGGCTG GATCGCCGGG CGCTGGCAAG
ACAGAGGCAT CATTAGCCCT GCTGAACCTT TTCTCTGATA CGCCGATCCT GCGAATCGAT
CCAGACGACC TCAGAAACGA ATTTGAAGCC TATCAAGGTG GCAATGCCTG GCTTTTCCAA
GGCGCCGTTT CAATTCTGGT AGGAAAGCTG ATTGATCTTG CCCTGGATCG AAAACAATCT
TTCCTGCTCG ACGGGACGCT TTCGAATATA GAAATCGCAA GGAACAATGT GCGGCGTTGC
CTGGACAAGG GGAGATTTGT ACAAATTCTC TATGTCTATC AAGACCCCAG GCTTGCCTGG
TCCTTTGTCA GGGCTCGTGA GGAAGCCGAA GGACGCAGAA TTCGACCGGA GCATTTCGTC
GACCAATATT TTGCAGCACG TGACGTGGTA AACACGCTTA AGCTAGAGTT TGGCAAGGAT
CTTCATGTCG ATCTGCTTGT GAAGCACATT GATAATTCTG GCCGCCTCTA CAAGGCTGGC
GTTGACAAGA TCGACTACCA TATCCCAGAG AAGCATACGA GACACGACCT GATGGCCATG
CTTGGGATAA ATGACGGAGC AACCCCATGT TTTCCATGA
 
Protein sequence
MQEDKRLGMT DEEQAIWDDA IRFARSNKKV IGKRLTDQTR YPPEKEPVSV FMAGSPGAGK 
TEASLALLNL FSDTPILRID PDDLRNEFEA YQGGNAWLFQ GAVSILVGKL IDLALDRKQS
FLLDGTLSNI EIARNNVRRC LDKGRFVQIL YVYQDPRLAW SFVRAREEAE GRRIRPEHFV
DQYFAARDVV NTLKLEFGKD LHVDLLVKHI DNSGRLYKAG VDKIDYHIPE KHTRHDLMAM
LGINDGATPC FP