11 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_11458 on replicon NC_011673
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011673  PHATRDRAFT_11458  COP9 SigNalosome subunit 6  100 
 
 
280 aa  575  1.0000000000000001e-163  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
BN001308  ANIA_10182  eukaryotic translation initiation factor 3 subunit EifCf, putative (AFU_orthologue; AFUA_1G09330)  32.75 
 
 
345 aa  154  2e-36  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.337207  normal  0.387432 
 
 
-
 
NC_009356  OSTLU_86356  predicted protein  34.29 
 
 
267 aa  137  2e-31  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_006691  CNF04540  conserved hypothetical protein  30.18 
 
 
303 aa  125  8.000000000000001e-28  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009360  OSTLU_41064  predicted protein  29.54 
 
 
332 aa  108  9.000000000000001e-23  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.854437  normal 
 
 
-
 
NC_011669  PHATRDRAFT_17259  regulatory proteasome non-atpase subunit 8  27.24 
 
 
334 aa  82.4  0.000000000000008  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  hitchhiker  0.000381364  n/a   
 
 
-
 
NC_009045  PICST_72792  predicted protein  25.17 
 
 
322 aa  78.6  0.0000000000001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.624478  normal 
 
 
-
 
NC_006670  CNA00350  proteasome regulatory subunit 12, putative  24.83 
 
 
350 aa  68.9  0.00000000008  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_006691  CNF03400  COP9 complex subunit 6, putative  24.14 
 
 
355 aa  65.9  0.0000000007  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009045  PICST_46961  predicted protein  27.86 
 
 
338 aa  61.6  0.00000001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
BN001305  ANIA_05121  hypothetical protein similar to proteasome regulatory subunit 8 RPN8 (Eurofung)  26.13 
 
 
349 aa  57.8  0.0000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
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