Gene PHATRDRAFT_11458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11458 
SymbolCSN6 
ID7199906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp281288 
End bp282130 
Gene Length843 bp 
Protein Length280 aa 
Translation table 
GC content48% 
IMG OID 
ProductCOP9 SigNalosome subunit 6 
Protein accessionXP_002178743 
Protein GI219115896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCATTGTGC ATCCAGTTGT TTTGCTCCAT GTTCTGGACC ATCACACACG ACGACAGGAA 
GAATCCGGCC GCGTGATTGG GACCTTATTA GGACGTCAAA ACGGCAATGT CGTGGAAGTA
ACCAACTGTT TTTCTGTACC GCATGCGGAG CGTGGCGAAG AAGTCGCAAT TGGTAAAGAT
TTCAACAAAA CCATGCTAGG TTTGCATTTG CGAGCGAATC GGAAAGAAAC TGTGGTGGGT
TGGTACGCGT CGGCAGCGAA TGGTGATAGT GAATCCAATG GGGATTTGAT CACAGATACA
TCGTCGTTGA TTCACGATTT TTATGCGGGA GAAGCAGACG AAGGAGACCC AGTCCATTTG
GTAGTCGACA CACGACTGAA GGAAGACAGT TTGTCGATGC GAGCATTCAA GTCTTCTCAA
ATTGTTGTAC AAGGCGAAGC AATGGGTAAC TTGTTTCACG AGTTGAAGCT TTCGCTCAAG
AGCAACGAGC CAGAAGCCAT TTGTCTGAAC CAAATGATTC GCACCGGCGG TGAATTGGTT
GCAAGCAAGG ACGAATCTAA TTCAGCGAAA GCGCTGCAGA TTTCTATGGA AAAGCTTTAC
GCTCTTCTCG AAAAAACTCT AGCATACGTA GACTCGGTAG TCGATGGGAA AACTCCTCCG
GATGCCGAAG CCGGACGTCA GATTGCTGAC ACGTTGGCGA CTGTTGCACG CGTTCGCCCT
GAAGTATTTG ACCGCCTTTT CCATGATAGC CTGCAAGACT TGCTCATGGT TTCGTACTTG
TCCAACATTA CTCGAACTCA AATGACCATT GCTGATAAGC TCAACGCGAG CCTGGGCGTG
TAG
 
Protein sequence
VIVHPVVLLH VLDHHTRRQE ESGRVIGTLL GRQNGNVVEV TNCFSVPHAE RGEEVAIGKD 
FNKTMLGLHL RANRKETVVG WYASAANGDS ESNGDLITDT SSLIHDFYAG EADEGDPVHL
VVDTRLKEDS LSMRAFKSSQ IVVQGEAMGN LFHELKLSLK SNEPEAICLN QMIRTGGELV
ASKDESNSAK ALQISMEKLY ALLEKTLAYV DSVVDGKTPP DAEAGRQIAD TLATVARVRP
EVFDRLFHDS LQDLLMVSYL SNITRTQMTI ADKLNASLGV