13 homologs were found in PanDaTox collection
for query gene CNA00350 on replicon NC_006670
Organism: Cryptococcus neoformans var. neoformans JEC21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_006670  CNA00350  proteasome regulatory subunit 12, putative  100 
 
 
350 aa  715    Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001305  ANIA_05121  hypothetical protein similar to proteasome regulatory subunit 8 RPN8 (Eurofung)  49.73 
 
 
349 aa  329  5.0000000000000004e-89  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_009360  OSTLU_41064  predicted protein  48.3 
 
 
332 aa  289  5.0000000000000004e-77  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.854437  normal 
 
 
-
 
NC_009045  PICST_46961  predicted protein  44.29 
 
 
338 aa  281  2e-74  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_011669  PHATRDRAFT_17259  regulatory proteasome non-atpase subunit 8  44.56 
 
 
334 aa  248  1e-64  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  hitchhiker  0.000381364  n/a   
 
 
-
 
NC_011673  PHATRDRAFT_11458  COP9 SigNalosome subunit 6  24.83 
 
 
280 aa  79  0.0000000000001  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
BN001308  ANIA_10182  eukaryotic translation initiation factor 3 subunit EifCf, putative (AFU_orthologue; AFUA_1G09330)  25.32 
 
 
345 aa  71.6  0.00000000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.337207  normal  0.387432 
 
 
-
 
NC_006691  CNF03400  COP9 complex subunit 6, putative  21.13 
 
 
355 aa  61.6  0.00000002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009356  OSTLU_86356  predicted protein  24.53 
 
 
267 aa  58.5  0.0000002  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_006691  CNF04540  conserved hypothetical protein  24.21 
 
 
303 aa  54.3  0.000003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001307  ANIA_02233  COP9 signalosome complex subunit 6 (Signalosome subunit 6) [Source:UniProtKB/Swiss-Prot;Acc:Q5BB47]  25.97 
 
 
386 aa  48.1  0.0002  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.510722  hitchhiker  0.00248788 
 
 
-
 
NC_006670  CNA02100  multidrug resistance protein, putative  29.46 
 
 
310 aa  46.6  0.0007  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001303  ANIA_04492  proteasome regulatory particle subunit (RpnK), putative (AFU_orthologue; AFUA_2G03400)  29.2 
 
 
338 aa  45.8  0.001  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0684928  normal  0.0283243 
 
 
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