Gene PICST_72792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_72792 
Symbol 
ID4839586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp916308 
End bp917365 
Gene Length1058 bp 
Protein Length322 aa 
Translation table12 
GC content47% 
IMG OID640390901 
Productpredicted protein 
Protein accessionXP_001384842 
Protein GI150865571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.624478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGAAAACAAC CAAATGCCAG AGCAGAGATC TTATATGCAC TTGGTCAGAC CCAACGTGGC 
TGCCCCAGGT GCTCCTGCCG CCAACGGCCC ACTGACCGTC AAGATCCAGG CTCCAGCCCT
TTTCCAAATC TTGGAAATAG TTTCCAAGCA AGTTCTCTAC ACAGACAAGC GTATTATCGG
TACTCTTTTA GGATCCCGTT CAGACGACTT ATCTGAGTTC GAAATCAAGC ATGCCTTCAT
GGTGCCCTGC AATGAGACAG GAGATTCCGT CACCATCGAA GATCACACAC ACAAGACATT
ATACCAGTTA TACAAGAAGG CTCATCCCAA GGATGCCGTG TTGGGTTGGT TCGGCTCTTC
CAGCACGATT GACAACACCA CTGGCTTGAT CCACGACTTT TACTCCAAGG GATCCGATAG
AGCATATCCT TACCCAGCCA TATACTTGAA TGTCGACTAC TTGAAAGACA ACCGTATTTC
CGAACCAAAG TTGTCCACCT ATATTGGTGC TGCTGTAGGA AAGCCAGTCA GTGGAGTCCA
GTTGGGCTGG AAGGCAAACA TCAACAACTA CATCTTCACG CCTATTCCCA ATGAAGTGAT
AAGCAGCTCC GTCACCGAAA AGATAGCGTT GAACAATTTA AGGGAAAAGT CCGTCAACAC
CGCTTCTTTC GTGTTGGACT CAGCCGAGGA CGCATCTTTC TTGTCGGCTC AGTTGGAAGC
TGTGACCTCC AACATTGACA AATTGCTTGC TGAGATTCTG AACGTAGACA ATTCTGATGC
CAACCTCGAC TTGTTGAGAT TGTTGAGCAA CAACTTGTTG AACAAGCCAC AACTTTTGAC
CAACTTGCCT GAGTTGGAAA GACTCTTCAG TGCCCACAAC CAGGACGTGA CTTTGATCGA
GTACTTGACC AAGGTCATCA AGGAACAGAT CGAGTTGAGT GCCAGATTGA CAGCCACTGC
CGAGGCCGAA AAGAAGTACT AGTAGCATAG TAATGTACAG TAATAACACA GAGCTAGGAG
ACGGAATGAT ACGTTTTTAG TTTTCCGTAT AGTCTATG
 
Protein sequence
MPEQRSYMHL VRPNVAAPGA PAANGPSTVK IQAPALFQIL EIVSKQVLYT DKRIIGTLLG 
SRSDDLSEFE IKHAFMVPCN ETGDSVTIED HTHKTLYQLY KKAHPKDAVL GWFGSSSTID
NTTGLIHDFY SKGSDRAYPY PAIYLNVDYL KDNRISEPKL STYIGAAVGK PVSGVQLGWK
ANINNYIFTP IPNEVISSSV TEKIALNNLR EKSVNTASFV LDSAEDASFL SAQLEAVTSN
IDKLLAEISN VDNSDANLDL LRLLSNNLLN KPQLLTNLPE LERLFSAHNQ DVTLIEYLTK
VIKEQIELSA RLTATAEAEK KY