Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_72792 |
Symbol | |
ID | 4839586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 916308 |
End bp | 917365 |
Gene Length | 1058 bp |
Protein Length | 322 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640390901 |
Product | predicted protein |
Protein accession | XP_001384842 |
Protein GI | 150865571 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.624478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGAAAACAAC CAAATGCCAG AGCAGAGATC TTATATGCAC TTGGTCAGAC CCAACGTGGC TGCCCCAGGT GCTCCTGCCG CCAACGGCCC ACTGACCGTC AAGATCCAGG CTCCAGCCCT TTTCCAAATC TTGGAAATAG TTTCCAAGCA AGTTCTCTAC ACAGACAAGC GTATTATCGG TACTCTTTTA GGATCCCGTT CAGACGACTT ATCTGAGTTC GAAATCAAGC ATGCCTTCAT GGTGCCCTGC AATGAGACAG GAGATTCCGT CACCATCGAA GATCACACAC ACAAGACATT ATACCAGTTA TACAAGAAGG CTCATCCCAA GGATGCCGTG TTGGGTTGGT TCGGCTCTTC CAGCACGATT GACAACACCA CTGGCTTGAT CCACGACTTT TACTCCAAGG GATCCGATAG AGCATATCCT TACCCAGCCA TATACTTGAA TGTCGACTAC TTGAAAGACA ACCGTATTTC CGAACCAAAG TTGTCCACCT ATATTGGTGC TGCTGTAGGA AAGCCAGTCA GTGGAGTCCA GTTGGGCTGG AAGGCAAACA TCAACAACTA CATCTTCACG CCTATTCCCA ATGAAGTGAT AAGCAGCTCC GTCACCGAAA AGATAGCGTT GAACAATTTA AGGGAAAAGT CCGTCAACAC CGCTTCTTTC GTGTTGGACT CAGCCGAGGA CGCATCTTTC TTGTCGGCTC AGTTGGAAGC TGTGACCTCC AACATTGACA AATTGCTTGC TGAGATTCTG AACGTAGACA ATTCTGATGC CAACCTCGAC TTGTTGAGAT TGTTGAGCAA CAACTTGTTG AACAAGCCAC AACTTTTGAC CAACTTGCCT GAGTTGGAAA GACTCTTCAG TGCCCACAAC CAGGACGTGA CTTTGATCGA GTACTTGACC AAGGTCATCA AGGAACAGAT CGAGTTGAGT GCCAGATTGA CAGCCACTGC CGAGGCCGAA AAGAAGTACT AGTAGCATAG TAATGTACAG TAATAACACA GAGCTAGGAG ACGGAATGAT ACGTTTTTAG TTTTCCGTAT AGTCTATG
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Protein sequence | MPEQRSYMHL VRPNVAAPGA PAANGPSTVK IQAPALFQIL EIVSKQVLYT DKRIIGTLLG SRSDDLSEFE IKHAFMVPCN ETGDSVTIED HTHKTLYQLY KKAHPKDAVL GWFGSSSTID NTTGLIHDFY SKGSDRAYPY PAIYLNVDYL KDNRISEPKL STYIGAAVGK PVSGVQLGWK ANINNYIFTP IPNEVISSSV TEKIALNNLR EKSVNTASFV LDSAEDASFL SAQLEAVTSN IDKLLAEISN VDNSDANLDL LRLLSNNLLN KPQLLTNLPE LERLFSAHNQ DVTLIEYLTK VIKEQIELSA RLTATAEAEK KY
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