Gene CNF03400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF03400 
Symbol 
ID3258359 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp1003335 
End bp1004855 
Gene Length1521 bp 
Protein Length355 aa 
Translation table 
GC content46% 
IMG OID638257458 
ProductCOP9 complex subunit 6, putative 
Protein accessionXP_571411 
Protein GI58268510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGCC CCTCCTCCAG CCCGCATGTG ATGCAATCCG GTGCTACATC TGGTGTGAAC 
ATCAAATTGT ACGTGAACTT CCCCCATGCC TAGTAATTTA TCTTAACCAT CTCAACAGAC
ATCCTCTAGC TATTCTCAAC ATTTCGGACG TCTATACTCG GGCTCAATGC ACCTCTACAG
GATCTGAAGT GCCTAAATGT ACGGGCTCAT TAGCCAAGAA ATCAGTTCCT GCCTACTGAC
TGTCGTTGAA TAGTGATCGG CGCGCTTCTC GGCACTGAGA GTAACCGCGA GATTGCTATC
GTCAACTCGT TTGAGCTTAT CTACCATCCC TCTGTGATGA GCGGTGAGGA TGTAGACATG
AGTGATAGCG GGTCCTCGGG CGGCAAATAC GTGCTCAACA CTGACTTCCT CGAAACGCGA
AAGGATCAAT GTGAGTTTTA TTCTCAAATC TAAGGATCTG CATGTTGACA TCATATATAC
AGTCAAGCAG GTATTTCCTA CACTCGATGT CATTGGGTGG TATTCTGTCG GCAAGGAGCC
TTCATCAGAT GACATTTCTC TCCATGCCCA ATTCGCTTCG TCGGTTGAAA CACCCATTTT
CCTCTTATTC GACCCCGACC CTGCTTCGGG CACTCAGGCT CTACCCTTGA AGATATATGA
ATCTGCCACT GTCACAGACA CCACAGGGGA AATCTCCGGG GAAGGAAAGT TTGTAGAGCT
GGAATATGGC ATCGAGACTG GCGAAGCGGA AAGAATTGCT GTAGATGGCG TTGCCAAAGG
CGGAGCGGGA GAGGAGGATA CTGGTACGTC CTGTTGCTGA ATCGCTCAAA ATCTTGCTGA
TGTGTTGTGA TGTAGCGGTT GCTCATCTCA CAACCCAGAG AAACGCTATC AAGATGCTGT
ATGACAGGAT AGAGATTTTG TTGAAATACG TCACCGGTGT AGTTAACAGT AAGATGACTT
GCCAAACCTT TGCAACGCAA GAGCTCACTT CCTATAGAAT CAGCCAAGCC TGATTACTCA
ATTCTCCGCC GAATTTCATC TCTCGTCGCA ACTCTTCCCA CTATGGATGC TGGCGAATTC
CGAGAAGAAC TTATAACTGT ATGTCCTATT CTTTAACCCT GTACGGAACT AACACTTTCG
TAGGAATACA GCGATGTCCA GATTAGTTCA TATTTGACAA CCCTGACCAA GCAGCTCAAC
GTCCTTAGCG AGGTATGTTA CGCTCTTCAG CACCTCATTC TAGCAACAAA AAAAAACAAA
CAAAAAACAA AAAACAAAAA AACTGATACC TGTCACAGTA CGCTGAAAAA CACTCCCTTG
TTTACGGTCA GAAGGAGGAT GAGTTCATGG GAGGCCCAAG TATGGGATTG AGAGGTGGTC
GACAGATGAA TTTCGACATG GGGGGAGGGA GAAGGCGGAG GTAATGAAGA AAAGAGTAGT
TGCTAGCTTT AACGAAGATT GGGTAGATTG TATGGAATAT GTACTATAGA TGATGTAAAT
GCTAAAGACA TGCATGAGTC A
 
Protein sequence
MSGPSSSPHV MQSGATSGVN IKLHPLAILN ISDVYTRAQC TSTGSEVPKL IGALLGTESN 
REIAIVNSFE LIYHPSVMSG EDVDMSDSGS SGGKYVLNTD FLETRKDQFK QVFPTLDVIG
WYSVGKEPSS DDISLHAQFA SSVETPIFLL FDPDPASGTQ ALPLKIYESA TVTDTTGEIS
GEGKFVELEY GIETGEAERI AVDGVAKGGA GEEDTAVAHL TTQRNAIKML YDRIEILLKY
VTGVVNKSAK PDYSILRRIS SLVATLPTMD AGEFREELIT EYSDVQISSY LTTLTKQLNV
LSEVCYALQH LILATKKNKQ KTKNKKTDTC HSTLKNTPLF TVRRRMSSWE AQVWD