| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_17259 |
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| Symbol | RPN8 |
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| ID | 7196093 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 386550 |
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| End bp | 387919 |
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| Gene Length | 1370 bp |
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| Protein Length | 334 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | regulatory proteasome non-atpase subunit 8 |
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| Protein accession | XP_002176574 |
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| Protein GI | 219109639 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000381364 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAACTCCATT TCGACCCGGA CACTGTGTTG AATTCACCAC CAACGTATTA TCTGTCGCTT
GTGACGCACA CTGCTGGCGT AACGATTTGT TGTCTTGCAG ATTTCCAAAT AACGCAGTAA
GCGAGGACTC TGGAATCCAT CCGCCCTCCC ACCCAAACAC AATGACTGCC ATGGAAACAG
AAAGCTCGGA AACCGTCGTA ACCAAGGCGC TTTCCTCTAC CGGACCAGAC ATCGACGAAG
TCGTTATTCA TCCGCTGGTT TTGCTGAGCG TCGCTGATCA CTATCACCGG GTAGCAAGAG
GTACACGAAA ACGCGTCGTT GGCGTTTTGT TGGGGCAGTC ACATCGTGGG AAAATCGATG
TATTGAATTC GTTCGCCCTT CCTTTTGAAG AAGACATTCG AAACCCGGTA CGTTGGGATC
TGGACAGAGG CGGCAAACGA CAAGATACCG CATTAACGAA AAGGAGTGTA TCGTGTTCAC
TGTCTAACAC TTCGTGTTGT CTGCTCACGT GGAATCTGCT GTCTTTTTTG TCGCTTCCGG
TCAGTCCGTC TTCTATTTCG ATCACAACTT TCTCGAGGAA ATGATTCGTC TATTCCGTAA
AGTCAACACC AAGGAAACTA TCGTCGGGTT TTACTCCACA GGCCCCTCAA TCCGACCCAA
CGATCTACGA ATTCACGATA TTTGCAAACG GTACGTTCGC ATCCCCATCT TTTGTATCAT
CGATATTCGC CCGGATCGTC AAGAGCTTCC CGTCAAGGCC TACAAGGTAG TGGAACAGGT
ACACCACGCC GGACAGGCTG TCACGCGACA GTTCGATCAC GTTAGTACGC AAATGGGTGC
CATGGAAGCG GAAGAAATCG GCGTTGCGCA TTTGTTGCGG GACATCAACG ACCCCACCGT
CAGTACGGTC ATGAGTTTGA TTCAGGGCAA GCTCAATGGT TTGCAATCCT TGACGGAAAA
ATTGTTGACC GCCAAGAAAT ATTTGCAGGC CTGTGCGGAG GGAAAGTGCA AAGTGAATAC
CGAAATTGTG GATCACTTGC AAACGATTGT CTCCCTGCTG CCGAATTTAA ATACTCCCGA
TCTGGTGCAC GCTATGATTG TCAAGACGAA CGATATGCAC ATGGCGGTTT ACTTGGCGTC
CTTAATTCGA TCAGTGATTG CCCTACACGA CCTTGTGAAC AACAAGATTC GCTACGGAGA
AGATGGCATG CAAGACAACG ACGAAGCGCT CGCGCAAGAG GAAGAAAAGA AAGAGGAGGA
GAAGCTCAAG GATACTGGAA ACAAGAAAGA CGGAGGGAAA TAACTATTTA CTTACCGTCA
AATAATGTAA ACGTTGTAGC AGGCTCTTAC CGTTTGAGCC ATGCCAATGC
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| Protein sequence | MTAMETESSE TVVTKALSST GPDIDEVVIH PLVLLSVADH YHRVARGTRK RVVGVLLGQS
HRGKIDVLNS FALPFEEDIR NPSVFYFDHN FLEEMIRLFR KVNTKETIVG FYSTGPSIRP
NDLRIHDICK RYVRIPIFCI IDIRPDRQEL PVKAYKVVEQ VHHAGQAVTR QFDHVSTQMG
AMEAEEIGVA HLLRDINDPT VSTVMSLIQG KLNGLQSLTE KLLTAKKYLQ ACAEGKCKVN
TEIVDHLQTI VSLLPNLNTP DLVHAMIVKT NDMHMAVYLA SLIRSVIALH DLVNNKIRYG
EDGMQDNDEA LAQEEEKKEE EKLKDTGNKK DGGK
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