13 homologs were found in PanDaTox collection
for query gene PC1_1478 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_1478    100 
 
 		 474 bp  940    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_1514  integrase family protein  83.48 
 
 		 1272 bp  222  7e-56  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_1693  integrase family protein  84.45 
 
 		 1272 bp  180  2e-43  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_1259    91.06 
 
 		 132 bp  157  2.9999999999999998e-36  Dickeya dadantii Ech703  Bacteria  normal  0.540765  n/a   
 
 
-
 
NC_013421  Pecwa_1561  integrase family protein  88.89 
 
 		 156 bp  129  8.000000000000001e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  0.744985  n/a   
 
 
-
 
NC_012912  Dd1591_1465    92.77 
 
 		 813 bp  117  3e-24  Dickeya zeae Ech1591  Bacteria  unclonable  0.0000159039  n/a   
 
 
-
 
NC_013421  Pecwa_1588    81.31 
 
 		 1184 bp  109  7e-22  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_1437    84.62 
 
 		 135 bp  91.7  2e-16  Dickeya dadantii Ech703  Bacteria  normal  0.73578  n/a   
 
 
-
 
NC_012912  Dd1591_1510    87.88 
 
 		 264 bp  67.9  0.000000002  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A2104  phage integrase family site specific recombinase  83.75 
 
 		 1263 bp  56  0.000009  Yersinia pestis Angola  Bacteria  hitchhiker  0.0000885987  normal  1 
 
 
-
 
NC_012880  Dd703_2465    83.58 
 
 		 96 bp  46.1  0.009  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_0501  integrase family protein  96.3 
 
 		 1260 bp  46.1  0.009  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_1163  nicotinate-nucleotide pyrophosphorylase  100 
 
 		 861 bp  46.1  0.009  Dehalococcoides sp. VS  Bacteria  normal  0.0699737  n/a   
 
 
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