Gene YpAngola_A2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2104 
Symbol 
ID5800574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2196574 
End bp2197836 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content53% 
IMG OID641340015 
Productphage integrase family site specific recombinase 
Protein accessionYP_001606561 
Protein GI162418528 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000885987 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTA CCGACGCAAA AATCCGCACC CTCAAGCCTT CTGATAAACC CTTTAAAGTC 
TCCGATTCTC ACGGTCTGTA TCTGCTGGTC AAGCCGGGTG GCTCCCGCCA CTGGTATCTC
AAATACCGTA TTAGCGGTAA AGAATCCCGC ATTGCGCTGG GTGCCTATCC AGCCATCTCT
CTGTCTGATG CGCGACAGCA ACGTGAAGGT ATCCGTAAAA TGCTGGCGCT GAATATCAAC
CCGGTACAGC AGCGGGCTGC TGAACGTGGC TCACGAACAC CGGAGAAAGT TTTTAAAAAC
GTGGCGCTGG CGTGGCATAA AAGTAACAGG AAATGGTCGC AGAACACCGC CGACCGTCTG
CTTGCCAGCC TGAACAATCA CATCTTTCCG GTCATCGGGA ACCTACCTGT ATCAGAACTT
AAACCCCGTC ATTTCATTGA CCTGCTGAAA GGGATCGAGG AAAAAGGTCT GCTGGAGGTT
GCGTCCCGCA CACGGCAGCA CCTGAGTAAC ATAATGCGCC ATGCGGTCCA TCAGGAGTTA
ATCGATACGA ACCCTGCAGC AAACCTTGGC GGCGTGACCA CACCTCCTGT CAGACGGCAC
TATCCTGCCC TGCCGCTGGA GCGGCTGCCT GAACTGCTTG AACGTATTGG GGCATATCAT
CAGGGCCGTG AACTGACCCG GCATGCCGTT CTGCTGATGC TGCATGTGTT CATTCGCTCC
AGTGAACTGC GTTTCGCCCG CTGGTCAGAG ATTGATTTCA CAAACCGAGT CTGGACGATA
CCCGCGACGC GAGAACCCAT TATTGGCGTG CGTTATTCCG GCCGCGGGGC AAAAATGCGA
ATGCCGCATA TCGTCCCCCT CTCAGAACAG TCCATCGCCA TTCTGAAACA GATTAAGGAT
ATCACCGGTA ATAATGAACT GATCTTCCCC GGCGACCATA ACCCGTATAA GCCAATGTGT
GAAAACACGG TCAATAAGGC ACTGCGGGGG ATGGGTTACG ACACGAAAAA GGATATCTGC
GGTCACGGCT TCCGGGCAAT GGCATGCAGT GCGCTGATGG AATCGGGTTT ATGGGCAAAG
GACGCAGTAG AACGCCAGAT GAGTCATCAG GAGCACAATA CCGTGCGCAT GGCTTATATT
CATAAGGCAG AGCACCTAGA AGCCCGCAAA GCGATGATGC AGTGGTGGTC GGATTATCTG
GAAGCATGCC GAGAATCTTA TGCACCGCCT TATACAATTG GTAAAAATAA GTTTATCCCA
TAG
 
Protein sequence
MSLTDAKIRT LKPSDKPFKV SDSHGLYLLV KPGGSRHWYL KYRISGKESR IALGAYPAIS 
LSDARQQREG IRKMLALNIN PVQQRAAERG SRTPEKVFKN VALAWHKSNR KWSQNTADRL
LASLNNHIFP VIGNLPVSEL KPRHFIDLLK GIEEKGLLEV ASRTRQHLSN IMRHAVHQEL
IDTNPAANLG GVTTPPVRRH YPALPLERLP ELLERIGAYH QGRELTRHAV LLMLHVFIRS
SELRFARWSE IDFTNRVWTI PATREPIIGV RYSGRGAKMR MPHIVPLSEQ SIAILKQIKD
ITGNNELIFP GDHNPYKPMC ENTVNKALRG MGYDTKKDIC GHGFRAMACS ALMESGLWAK
DAVERQMSHQ EHNTVRMAYI HKAEHLEARK AMMQWWSDYL EACRESYAPP YTIGKNKFIP