| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0501 |
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| Symbol | |
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| ID | 8131417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 583483 |
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| End bp | 584742 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863778 |
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| Product | integrase family protein |
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| Protein accession | YP_003016092 |
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| Protein GI | 253686902 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACTG ACAGCAAAGT CCGATCTGCG AAACATCTCG CAAAATCTTA TAAGCTCACT
GATTCGCAAG GCCTGTACCT CACGGTATCA CCCAGCGGCG CTAAGCTATG GTATTTCCGT
TATCGCTTCG GCGGTAAAGA AAACCGTCTG GCCTTTGGCC CCTACCCTCA AATCACACTG
GCAGAAGCCC GCGAAAAGCG CGATGCGGCA CGTAAGCTAC TGGCGTCTGG ACTCAGCCCT
TCTCAGCTTC GTAAATCGAA CAACCCCGCC GTTGAGGAAT CCCGCACCTT TCAGTATGTC
GCGATGACAT GGCACACCAG CAGCCTTAAG CTCTGGTCGG AAGCACATGC CGATAAAATT
CTCACCTGCC TGAAACGCTA CGTTTTCCCC GCTATTGGTT CAATGGACAT CGCTCAGGTT
GAAACCCGCC ATCTGGCACA GTTGGTTAAG GCGATTGACG ATAAAGGCGT GCATGACGTC
GCCGGACGGG TGCGCCAGCA TCTGACCAAA ATCATGCGCC ACGCCGTCCA GCAGGGAGTA
ATCAAATATA ATCCGGCTTA CGATTTAGAT GGCGTCGTGA CCCCGGTCGT GACCCAACAT
CACCCCGCCC TACCACTGAA ACGCCTGCCG GAACTGCTGG AGAAGATAGA GAACTACAAA
GGCCGGATGC TGACCCGTCT GGCGCTGGAG TTGAATCTGC ATGTCTTTCT ACGCTCCAGT
GAGCTGCGTT TTGCCCGCTG GGATGAATTC AACCTGAAAG CGCATATCTG GAGCGTACCC
GCCCAGCGCG AGGCAGTAAA CGGCGTGAGG TTCTCAGAAC GCGGAGCCAA GATGAAGGAT
GAACATCTGG TGCCGCTGTC ACGGCAGGCG GTCGCCCTGC TGAAACAGAT TCAGGCGTAT
TCCGGCGAAT CGGTCTTCGT TTTTCCGGGC GCACATACCC TGAACAAGCC GATGAGTGAA
AACACCATCA ACAAAGCGCT GCGTGTGATT GGCTATGACA CCAAAACCGA AATCTGCGGC
CACGGCTTCA GAACCATGGC CTGTAGCGCC CTGAACGAGT CCGGACGCTG GTCAAAGGAT
GCCATTGAGA GGCAGATGAG TCACAAAGAA CGCAACGGCG TGCGGGCTGC TTACGTGCAT
AAAGCCGAGC ATCTGGAAGC CAGAATCGAA ATGATGCAAT GGTGGTCGGA TTATCTGGAC
GTTAACCGCG AGGGCTACGT CGCGCCGTAT ATTTATGCGC GAAATTACAC GGTTGGCTAA
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| Protein sequence | MLTDSKVRSA KHLAKSYKLT DSQGLYLTVS PSGAKLWYFR YRFGGKENRL AFGPYPQITL
AEAREKRDAA RKLLASGLSP SQLRKSNNPA VEESRTFQYV AMTWHTSSLK LWSEAHADKI
LTCLKRYVFP AIGSMDIAQV ETRHLAQLVK AIDDKGVHDV AGRVRQHLTK IMRHAVQQGV
IKYNPAYDLD GVVTPVVTQH HPALPLKRLP ELLEKIENYK GRMLTRLALE LNLHVFLRSS
ELRFARWDEF NLKAHIWSVP AQREAVNGVR FSERGAKMKD EHLVPLSRQA VALLKQIQAY
SGESVFVFPG AHTLNKPMSE NTINKALRVI GYDTKTEICG HGFRTMACSA LNESGRWSKD
AIERQMSHKE RNGVRAAYVH KAEHLEARIE MMQWWSDYLD VNREGYVAPY IYARNYTVG
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