25 homologs were found in PanDaTox collection
for query gene Noc_R0048 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007484  Noc_R0048  SRP RNA; RNA component of signal recognition  100 
 
 		 118 bp  234  4.0000000000000004e-60  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0970685  n/a   
 
 
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NC_011901  Tgr7_R0017  SRP RNA; RNA component of signal recognitionparti cle  86.05 
 
 		 118 bp  75.8  0.000000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
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NC_008345  Sfri_R0088  SRP RNA; RNA component of signal recognition particle  83.72 
 
 		 115 bp  60  0.0000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
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NC_008789  Hhal_R0005  SRP RNA  97.06 
 
 		 118 bp  60  0.0000001  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
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NC_009135  MmarC5_R0004  SRP RNA; RNA component of signal recognition particle  96.97 
 
 		 307 bp  58  0.0000005  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
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NC_011761  AFE_1918  sRNA  96.97 
 
 		 105 bp  58  0.0000005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
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NC_009634  Mevan_R0013  SRP RNA; RNA component of signal recognition particle  96.97 
 
 		 307 bp  58  0.0000005  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
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NC_009637  MmarC7_R0010  SRP RNA; RNA component of signal recognition particle  96.97 
 
 		 307 bp  58  0.0000005  Methanococcus maripaludis C7  Archaea  normal  1  normal  1 
 
 
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NC_011761  AFE_1917  Bacterial signal recognition particle RNA  96.97 
 
 		 100 bp  58  0.0000005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
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NC_011206  Lferr_R0056  SRP RNA; RNA component of signal recognition particle  96.97 
 
 		 119 bp  58  0.0000005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.654574  normal  0.0337609 
 
 
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NC_007912  Sde_R0021  SRP RNA; RNA component of signal recognitionparticle  82.76 
 
 		 110 bp  54  0.000008  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
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NC_013926  Aboo_R0005  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 307 bp  50.1  0.0001  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
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NC_013422  Hneap_R0025  SRP RNA; RNA component of signal recognition particle  91.89 
 
 		 118 bp  50.1  0.0001  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
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NC_009975  MmarC6_R0040  SRP RNA; RNA component of signal recognition particle  96.55 
 
 		 307 bp  50.1  0.0001  Methanococcus maripaludis C6  Archaea  normal  0.0420787  n/a   
 
 
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NC_013889  TK90_R0044  SRP RNA; RNA component of signal recognition particle  85.71 
 
 		 119 bp  48.1  0.0005  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0198539  normal  0.360014 
 
 
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NC_010117  COXBURSA331_A2225  bacterial signal recognition particle RNA  91.43 
 
 		 100 bp  46.1  0.002  Coxiella burnetii RSA 331  Bacteria  normal  0.101315  n/a   
 
 
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NC_011728  BbuZS7_0472  Bacterial signal recognition particle RNA  91.43 
 
 		 100 bp  46.1  0.002  Borrelia burgdorferi ZS7  Bacteria  normal  1  n/a   
 
 
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NC_009727  CBUD_0669a  hypothetical protein  91.43 
 
 		 165 bp  46.1  0.002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
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NC_009439  Pmen_R0047  SRP RNA; RNA component of signal recognition particle  93.55 
 
 		 118 bp  46.1  0.002  Pseudomonas mendocina ymp  Bacteria  normal  0.292586  normal  1 
 
 
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NC_008740  Maqu_R0035  SRP RNA; RNA component of signal recognition particle  93.55 
 
 		 117 bp  46.1  0.002  Marinobacter aquaeolei VT8  Bacteria  normal  0.0122517  n/a   
 
 
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NC_012560  Avin_65170  bacterial signal recognition particle RNA SRP_bact  93.55 
 
 		 98 bp  46.1  0.002  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
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NC_008340  Mlg_R0042  SRP RNA; RNA component of signal recognition particle  85.45 
 
 		 118 bp  46.1  0.002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.332893  normal  0.55167 
 
 
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NC_010003  Pmob_R0041  SRP RNA; RNA component of signal recognitionparticle  100 
 
 		 101 bp  44.1  0.008  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
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NC_010320  Teth514_R0006  SRP RNA; RNA component of signal recognition particle  91.18 
 
 		 120 bp  44.1  0.008  Thermoanaerobacter sp. X514  Bacteria  normal  0.0386858  n/a   
 
 
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NC_008554  Sfum_R0010  SRP RNA; RNA component of signal recognition particle  91.18 
 
 		 94 bp  44.1  0.008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
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