28 homologs were found in PanDaTox collection
for query gene MmarC7_R0010 on replicon NC_009637
Organism: Methanococcus maripaludis C7



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009637  MmarC7_R0010  SRP RNA; RNA component of signal recognition particle  100 
 
 		 307 bp  609  9.999999999999999e-173  Methanococcus maripaludis C7  Archaea  normal  1  normal  1 
 
 
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NC_009135  MmarC5_R0004  SRP RNA; RNA component of signal recognition particle  98.05 
 
 		 307 bp  561  1e-158  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
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NC_009975  MmarC6_R0040  SRP RNA; RNA component of signal recognition particle  97.72 
 
 		 307 bp  553  1e-155  Methanococcus maripaludis C6  Archaea  normal  0.0420787  n/a   
 
 
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NC_009634  Mevan_R0013  SRP RNA; RNA component of signal recognition particle  87.97 
 
 		 307 bp  274  1e-71  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
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NC_011206  Lferr_R0056  SRP RNA; RNA component of signal recognition particle  100 
 
 		 119 bp  61.9  0.0000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.654574  normal  0.0337609 
 
 
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NC_011761  AFE_1918  sRNA  100 
 
 		 105 bp  61.9  0.0000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_008789  Hhal_R0005  SRP RNA  100 
 
 		 118 bp  61.9  0.0000001  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
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NC_011761  AFE_1917  Bacterial signal recognition particle RNA  100 
 
 		 100 bp  61.9  0.0000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
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NC_013926  Aboo_R0005  SRP RNA; RNA component of signal recognition particle  96.97 
 
 		 307 bp  58  0.000001  Aciduliprofundum boonei T469  Archaea  normal  1  n/a   
 
 
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NC_007484  Noc_R0048  SRP RNA; RNA component of signal recognition  96.97 
 
 		 118 bp  58  0.000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0970685  n/a   
 
 
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NC_011891  A2cp1_R0054  SRP RNA; RNA component of signal recognitionparti cle  94.44 
 
 		 109 bp  56  0.000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0792921  n/a   
 
 
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NC_011145  AnaeK_R0054  SRP RNA; RNA component of signal recognitionparti cle  94.44 
 
 		 109 bp  56  0.000006  Anaeromyxobacter sp. K  Bacteria  normal  0.431855  n/a   
 
 
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NC_007963  Csal_R0046  SRP RNA; RNA component of signal recognition particle  94.29 
 
 		 118 bp  54  0.00002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_R0021  SRP RNA; RNA component of signal recognitionparticle  94.29 
 
 		 110 bp  54  0.00002  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_65170  bacterial signal recognition particle RNA SRP_bact  94.12 
 
 		 98 bp  52  0.00009  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
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NC_009727  CBUD_0669a  hypothetical protein  94.12 
 
 		 165 bp  52  0.00009  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
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NC_010320  Teth514_R0006  SRP RNA; RNA component of signal recognition particle  94.12 
 
 		 120 bp  52  0.00009  Thermoanaerobacter sp. X514  Bacteria  normal  0.0386858  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2225  bacterial signal recognition particle RNA  94.12 
 
 		 100 bp  52  0.00009  Coxiella burnetii RSA 331  Bacteria  normal  0.101315  n/a   
 
 
-
 
NC_008554  Sfum_R0010  SRP RNA; RNA component of signal recognition particle  94.12 
 
 		 94 bp  52  0.00009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_R0042  SRP RNA; RNA component of signal recognition particle  100 
 
 		 118 bp  52  0.00009  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.332893  normal  0.55167 
 
 
-
 
NC_009675  Anae109_R0052  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 111 bp  50.1  0.0004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.270066  normal  0.727224 
 
 
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NC_009439  Pmen_R0047  SRP RNA; RNA component of signal recognition particle  96.55 
 
 		 118 bp  50.1  0.0004  Pseudomonas mendocina ymp  Bacteria  normal  0.292586  normal  1 
 
 
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NC_008740  Maqu_R0035  SRP RNA; RNA component of signal recognition particle  96.55 
 
 		 117 bp  50.1  0.0004  Marinobacter aquaeolei VT8  Bacteria  normal  0.0122517  n/a   
 
 
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NC_011901  Tgr7_R0017  SRP RNA; RNA component of signal recognitionparti cle  93.94 
 
 		 118 bp  50.1  0.0004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
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NC_013422  Hneap_R0025  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 118 bp  50.1  0.0004  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_R0053  SRP RNA; RNA component of signal recognition particle  93.94 
 
 		 112 bp  50.1  0.0004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.148167  n/a   
 
 
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NC_011146  Gbem_R0005  SRP RNA; RNA component of signal recognition particle  93.55 
 
 		 109 bp  46.1  0.006  Geobacter bemidjiensis Bem  Bacteria  normal  0.803178  n/a   
 
 
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NC_009635  Maeo_R0035  SRP RNA; RNA component of signal recognition particle  91.43 
 
 		 308 bp  46.1  0.006  Methanococcus aeolicus Nankai-3  Archaea  normal  1  n/a   
 
 
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