23 homologs were found in PanDaTox collection
for query gene Nham_4162 on replicon NC_007959
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007959  Nham_4162  putative bacterioferritin  100 
 
 
85 aa  172  1.9999999999999998e-42  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2904  putative bacterioferritin  92.94 
 
 
85 aa  161  2.0000000000000002e-39  Nitrobacter hamburgensis X14  Bacteria  normal  0.387313  n/a   
 
 
-
 
NC_007406  Nwi_2476  putative bacterioferritin  87.95 
 
 
85 aa  151  2.9999999999999998e-36  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6243  putative bacterioferritin-associated ferredoxin  72.73 
 
 
92 aa  116  9e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2705  BFD domain protein (2Fe-2S)-binding domain protein  45.78 
 
 
85 aa  76.3  0.0000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2100  BFD domain protein (2Fe-2S)-binding domain protein  60.71 
 
 
96 aa  75.5  0.0000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.380448  normal  0.385835 
 
 
-
 
NC_010172  Mext_1764  hypothetical protein  60.71 
 
 
96 aa  75.5  0.0000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.842714  normal 
 
 
-
 
NC_010725  Mpop_1530  hypothetical protein  58.93 
 
 
89 aa  75.5  0.0000000000003  Methylobacterium populi BJ001  Bacteria  normal  0.53579  normal  0.412285 
 
 
-
 
NC_010505  Mrad2831_0112  hypothetical protein  57.89 
 
 
97 aa  73.2  0.000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.320522 
 
 
-
 
NC_011004  Rpal_4121  putative bacterioferritin  57.14 
 
 
66 aa  72  0.000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.286534  n/a   
 
 
-
 
NC_010511  M446_0656  hypothetical protein  57.14 
 
 
85 aa  70.9  0.000000000005  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2143  BFD-like (2Fe-2S)-binding region  52.63 
 
 
148 aa  70.5  0.000000000007  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.583113  normal  0.0154138 
 
 
-
 
NC_011894  Mnod_6132  BFD domain protein (2Fe-2S)-binding domain protein  57.14 
 
 
85 aa  69.7  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1519  BFD domain protein (2Fe-2S)-binding domain protein  57.14 
 
 
85 aa  69.7  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.155028  n/a   
 
 
-
 
NC_009485  BBta_5937  hypothetical protein  53.33 
 
 
80 aa  68.9  0.00000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3766  BFD/(2Fe-2S)-binding domain-containing protein  46.05 
 
 
80 aa  68.2  0.00000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2877  BFD domain protein (2Fe-2S)-binding domain protein  58.33 
 
 
128 aa  67.4  0.00000000007  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0193473 
 
 
-
 
NC_007778  RPB_1931  BFD-like (2Fe-2S)-binding region  59.26 
 
 
69 aa  66.2  0.0000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2582  hypothetical protein  54.69 
 
 
104 aa  58.9  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0356  hypothetical protein  49.12 
 
 
97 aa  58.2  0.00000003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.874807  normal 
 
 
-
 
NC_010511  M446_3544  hypothetical protein  47.76 
 
 
94 aa  52.8  0.000001  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00943774 
 
 
-
 
NC_011365  Gdia_2924  BFD domain protein (2Fe-2S)-binding domain protein  36.07 
 
 
79 aa  40.4  0.008  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0289108  normal 
 
 
-
 
NC_011901  Tgr7_2726  BFD domain protein (2Fe-2S)-binding domain protein  37.5 
 
 
72 aa  40.4  0.009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
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