9 homologs were found in PanDaTox collection
for query gene Mpop_5145 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007406  Nwi_0730  type IV secretory pathway VirD4 components  76.52 
 
 		 459 aa  707    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0208837  normal  1 
 
 
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NC_010725  Mpop_5145  type IV secretory pathway VirD4 components  100 
 
 		 453 aa  928    Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
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NC_009720  Xaut_0243  Type IV secretory pathway VirD4 protein-like protein  21.15 
 
 		 467 aa  48.9  0.0002  Xanthobacter autotrophicus Py2  Bacteria  hitchhiker  0.00639777  decreased coverage  0.000749046 
 
 
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NC_011981  Avi_7061  conjugal transfer coupling protein TraG  26.4 
 
 		 655 aa  46.2  0.001  Agrobacterium vitis S4  Bacteria  normal  0.920891  n/a   
 
 
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NC_012853  Rleg_5517  conjugal transfer coupling protein TraG  25.68 
 
 		 665 aa  44.7  0.004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.0112559 
 
 
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NC_013216  Dtox_2467  TRAG family protein  21.24 
 
 		 511 aa  43.9  0.006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.606871  hitchhiker  0.00000000721319 
 
 
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NC_009667  Oant_0647  conjugal transfer coupling protein TraG  20.77 
 
 		 637 aa  43.5  0.008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.600969  n/a   
 
 
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NC_011982  Avi_8128  conjugal transfer coupling protein TraG  26.49 
 
 		 654 aa  43.5  0.008  Agrobacterium vitis S4  Bacteria  normal  0.147947  n/a   
 
 
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NC_009717  Xaut_5000  conjugal transfer coupling protein TraG  22.03 
 
 		 635 aa  43.1  0.01  Xanthobacter autotrophicus Py2  Bacteria  normal  0.763698  normal  1 
 
 
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