| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5145 |
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| Symbol | |
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| ID | 6309577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5511116 |
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| End bp | 5512477 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642653828 |
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| Product | type IV secretory pathway VirD4 components |
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| Protein accession | YP_001927776 |
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| Protein GI | 188584331 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC CCGTCCCCGC CTATCGCAAT CTCCGCCGCG GCATCGAGCT CGGCTTCATC
AATGGCTGGC CGCTCGTCTA TGACGGCACT AAGCCTGTCG CGATCGATGC GCAGGCCGGT
AAGGGCAAGC TGACCCGCTT CCTCGGCGCG AACCTGGTCT CGCCGCGGAC CGCCCATCTC
GGGAAGATCA TCACTGACCC GAAAGACGGC GAACTCGCCT GGGTGTCGTG GGTAACGCTC
GCGCGTCAGG GCTATGACGT GCGATTCATC AACGCCAACG GCCTGCACGG CTACCCATCC
GAGAGCTACA ATATCAACAC GCGGGTGATC GGGACGGCGG CGAACCCCGC GCAGCGCGGC
ATCGTCGGTG AGGCCGCCTA TGACGCCGCG AGCTTCCTTG TGCCGCAGGA CCCGGAGTCG
AAGAACCGCT GGGTAAGCCA GGGCGTGCGC ACCATGTTCA CGCTCTACAA CAAGGTGACT
GCTCTCTACC CGTCCGATCG ATGGTCCTGC TCGCCGGGCG GCTTGTGGGA CTTCTGGGGC
CGCCCGCGCG GCGAGATCGC TGATGACCTC TTACTGTGGG CATCGGACCG GCGGATGGTG
GATGAGGCTA GCATGTGCCG CCTGATGGCC GGGCTAACAG CTTCAACGGA TCAATGGAAC
GCCTATGCCT CGCTCATCAT CGAACGGCTG CAAGGCTTTC AGCTGGGCAT GGCGGCCCGC
GAGATCACGA GCCGCAACTC GTTCGATCCG GCAGATATGA AGCGCAAGCG CACCGCCCTT
TTCATTATCG GCTCGGCGCG TTCGGAGACC AGCCGCACCT TCGTTGGCGC AATGACCGCT
GCCGTGATCG AGCGCTTTGT CGATGCGCAA GGGCCGCTGC GCGCACTCGT GGTCGGCGAG
GAATGGGGCC AGCTCTACGT TTCGAACTTC TACGAGGTCC TGACCCTCTA TCGCCAGGGC
GGCATCAACT TTCTCGGCGT GTTCCAGAAC GCAGCGGCGC AGATCGAGAC GCGCTATGGG
CGTGAGACCG CACGTATCTG GAAAAAGGCT GTGGCTCACA CGCTCTATCG CGGCCTACCG
GACGGTGACA CACTCAAAGA GATCGAGCAC CGCTCCGGCA AAACCTCAGT GATGGTGCGT
GGTTTCAACG TGAACTCGAA TCAGGTGAAC GGGTCGGGGG ATAGCCTCGT TGAGCAAGCG
CGCCCGCTCC TCCAGGTCGA AGACATCCGG CGAGCAACGG GCGGTGAGAC CTCCCTGCTT
GATTCCCGCG ATTGGGGCTT CTTTGAGGTA GAAACACCAG ACTTTTGGAA GCGGCGCGAT
TTATCACATC TCCTTCGAGA TACGCGGTCG CTAATTAGTT GA
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| Protein sequence | MTLPVPAYRN LRRGIELGFI NGWPLVYDGT KPVAIDAQAG KGKLTRFLGA NLVSPRTAHL
GKIITDPKDG ELAWVSWVTL ARQGYDVRFI NANGLHGYPS ESYNINTRVI GTAANPAQRG
IVGEAAYDAA SFLVPQDPES KNRWVSQGVR TMFTLYNKVT ALYPSDRWSC SPGGLWDFWG
RPRGEIADDL LLWASDRRMV DEASMCRLMA GLTASTDQWN AYASLIIERL QGFQLGMAAR
EITSRNSFDP ADMKRKRTAL FIIGSARSET SRTFVGAMTA AVIERFVDAQ GPLRALVVGE
EWGQLYVSNF YEVLTLYRQG GINFLGVFQN AAAQIETRYG RETARIWKKA VAHTLYRGLP
DGDTLKEIEH RSGKTSVMVR GFNVNSNQVN GSGDSLVEQA RPLLQVEDIR RATGGETSLL
DSRDWGFFEV ETPDFWKRRD LSHLLRDTRS LIS
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