15 homologs were found in PanDaTox collection
for query gene Meso_4552 on replicon NC_008243
Organism: Chelativorans sp. BNC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008243  Meso_4552  PilT protein-like  100 
 
 
141 aa  281  2.0000000000000002e-75  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1319  PilT domain-containing protein  78.26 
 
 
142 aa  221  3e-57  Sphingomonas wittichii RW1  Bacteria  normal  0.112647  normal  0.582944 
 
 
-
 
NC_010172  Mext_2930  PilT domain-containing protein  75.71 
 
 
141 aa  219  9.999999999999999e-57  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.156891 
 
 
-
 
NC_010725  Mpop_3051  PilT protein domain protein  75.18 
 
 
141 aa  194  3e-49  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1705  PilT protein domain protein  45.71 
 
 
140 aa  123  8.000000000000001e-28  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.138203 
 
 
-
 
NC_009379  Pnuc_0693  PilT domain-containing protein  31.91 
 
 
140 aa  81.3  0.000000000000004  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3887  PilT protein domain protein  36.5 
 
 
142 aa  75.9  0.0000000000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1699  hypothetical protein  43.9 
 
 
90 aa  71.6  0.000000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0322775 
 
 
-
 
NC_010338  Caul_1776  PilT domain-containing protein  35.25 
 
 
141 aa  65.1  0.0000000003  Caulobacter sp. K31  Bacteria  normal  normal  0.0811808 
 
 
-
 
NC_011206  Lferr_2597  hypothetical protein  29.71 
 
 
150 aa  62.8  0.000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2984  PIN domain protein  29.71 
 
 
150 aa  62.8  0.000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.212905  n/a   
 
 
-
 
NC_009943  Dole_1783  PilT domain-containing protein  32.17 
 
 
144 aa  59.7  0.00000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0894  hypothetical protein  34.31 
 
 
143 aa  56.6  0.0000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1316  PilT domain-containing protein  30.71 
 
 
142 aa  55.1  0.0000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.187557  n/a   
 
 
-
 
NC_010511  M446_1967  PilT domain-containing protein  33.93 
 
 
129 aa  52.8  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  0.164487  normal 
 
 
-
 
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