Gene Pnuc_0693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0693 
Symbol 
ID5053803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp692902 
End bp693324 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content37% 
IMG OID640470848 
ProductPilT domain-containing protein 
Protein accessionYP_001155475 
Protein GI145588878 
COG category[R] General function prediction only 
COG ID[COG1848] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATA TTGATACCAG TATTTTAGTG GCCTTATGTA CAGCAGAAGA AAAGAGTGAC 
GCTGTTGATA AATGGCATGA AAACAGTTCC GTAAAAATGA TTTCTTCTAG TTGGGCATTT
ACAGAATTCT CTAGCGCACT TAGCCTGAAG GTCAGAACCA ATCAATTAAC CGAAAAACAG
AGTCGTGAAG CTTGGAAAAA ATTTGACAAT CTCTGCCAGA ACGATATTGA GCTAATGCCC
ATCGAGAACA AAACGTATTA CTCTGCTGGA ATTTTAGTTG TTGATAGCAA GTCAAACCTC
AAAGCTGGTG ACGCACTTCA TCTTGCCGCC GCAAAGCAAT TCAAATCTAA ATCTTTGGCA
ACTCTTGATA AAGTTTTAGC AAAAAACGTT GCTAGAGTAA AAATTAAAGC CGTTCTAATT
TAA
 
Protein sequence
MIYIDTSILV ALCTAEEKSD AVDKWHENSS VKMISSSWAF TEFSSALSLK VRTNQLTEKQ 
SREAWKKFDN LCQNDIELMP IENKTYYSAG ILVVDSKSNL KAGDALHLAA AKQFKSKSLA
TLDKVLAKNV ARVKIKAVLI