Gene Dole_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1783 
Symbol 
ID5694623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2148267 
End bp2148701 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content51% 
IMG OID641264381 
ProductPilT domain-containing protein 
Protein accessionYP_001529664 
Protein GI158521794 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATG TGGATACAAG TGTTCTGGCG GCATATTACT GTCCGGAACC TCTAAGCCGC 
CAGGTCCAGG AACTGTTGAG AAAAGAGGCG AAACCGGCCC TGAGTTATCT TGCCGAGGTA
GAGCTTGTTT CCGCAGTGGC TAGAAAAGTG CGAACAAAGG AACTGAACGA TACGGACGGA
AACCGCATCC TGATGAAATT CAGCAGCCAT GTGAATGCCG GCCTGTTTCA CGTTATTCCG
GTGGAGCGCC ACCACTGGCA GATGGCAAAA GACTGGATCG GATTCTTTAA AACATCCCTG
CGAACCCTTG ACGCGCTGCA CCTTGCCCTT GCGTCCGACC ATGGACTACA ACTTGTGACA
TCCGATAAAT CTTTTTTTCA GGCCGCCGGA AAGTTTGACG TGGATGCACG ACTGATAGTC
CCGGGGAAGA AATAA
 
Protein sequence
MIYVDTSVLA AYYCPEPLSR QVQELLRKEA KPALSYLAEV ELVSAVARKV RTKELNDTDG 
NRILMKFSSH VNAGLFHVIP VERHHWQMAK DWIGFFKTSL RTLDALHLAL ASDHGLQLVT
SDKSFFQAAG KFDVDARLIV PGKK