9 homologs were found in PanDaTox collection
for query gene MADE_00237 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009665  Shew185_3333  membrane or secreted protein  47.61 
 
 
864 aa  769    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00237  membrane of secreted protein  100 
 
 
858 aa  1769    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.674683  n/a   
 
 
-
 
NC_011663  Sbal223_1076  membrane of secreted protein  47.67 
 
 
865 aa  769    Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00939077 
 
 
-
 
NC_013501  Rmar_0489  membrane of secreted protein  40.85 
 
 
835 aa  607  9.999999999999999e-173  Rhodothermus marinus DSM 4252  Bacteria  normal  0.590507  n/a   
 
 
-
 
NC_013132  Cpin_6170  membrane or secreted protein  39.13 
 
 
844 aa  526  1e-148  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.433726  normal  0.0340627 
 
 
-
 
NC_013037  Dfer_0809  membrane or secreted protein  32.89 
 
 
850 aa  447  1.0000000000000001e-124  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.764502  normal 
 
 
-
 
NC_007912  Sde_0611  hypothetical protein  31.82 
 
 
306 aa  148  3e-34  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2698  glycoside hydrolase family 5  30.33 
 
 
390 aa  49.7  0.0002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1591  carbohydrate binding module 27  28.7 
 
 
669 aa  45.4  0.004  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00319954  n/a   
 
 
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