Gene TRQ2_1591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1591 
Symbol 
ID6093040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1603667 
End bp1605676 
Gene Length2010 bp 
Protein Length669 aa 
Translation table11 
GC content49% 
IMG OID642488792 
Productcarbohydrate binding module 27 
Protein accessionYP_001739610 
Protein GI170289372 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3934] Endo-beta-mannanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00319954 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAGAT TTATGTTCAT TTTATTGATC GTTGAGCTCT CTTTCGTTCT CTTTGCAAGT 
GACGAGTTCG TGAAAGTGGA AAACGGAAAA TTCGCTCTGA ACGGAAAAGA ATTCAGATTC
ATTGGAAGCA ACAACTACTA CATGCACTAC AAGAGCAACA GAATGATAGA CAGTGTTCTG
GAGAGTGCCA GAGACATGGG TATAAAGGTC CTCAGAATCT GGGGTTTCCT CGACGGGGAG
AGTTACTGCA GAGACAAGAA CACCTACATG CATCCTGAGC CCGGTGTTTT CGGGGTGCCA
GAAGGAATAT CGAACGCCCA GAGCGGTTTC GAAAGACTCG ACTACACAGT TGCGAAAGCG
AAAGAACTCG GTATAAAACT TGTCATTGTT CTTGTGAACA ACTGGGACGA CTTCGGTGGA
ATGAACCAGT ACGTGAGGTG GTTTGGAGGA ACCCATCACG ACGATTTCTA CAGAGATGAG
AAGATCAAAG AAGAGTACAA AAAGTACGTC TCCTTCCTCG TAAACCATGT CAATACCTAC
ACGGGAGTTC CTTACAGGGA AGAGCCCACC ATCATGGCCT GGGAGCTTGC AAACGAACCG
CGCTGTGAGA CGGACAAATC GGGGAACACG CTCGTTGAGT GGGTGAAGGA GATGAGCTCC
TACATAAAGA GTCTGGATCC CAACCACCTC GTGGCTGTGG GGGACGAAGG ATTCTTCAGC
AACTACGAAG GATTCAAACC TTACGGTGGA GAAGCCGAGT GGGCCTACAA CGGCTGGTCC
GGTGTTGACT GGAAGAAGCT CCTTTCGATA GAGACGGTGG ACTTCGGCAC GTTCCACCTC
TATCCGTCCC ACTGGGGTGT CAGTCCAGAG AACTATGCCC AGTGGGGAGC GAAGTGGATA
GAAGACCACA TAAAGATCGC AAAAGAGATC GGAAAACCCG TTGTTCTGGA AGAATATGGA
ATTCCAAAGA GTGCGCCAGT TAACAGAACG GCCATCTACA GACTCTGGAA CGATCTGGTC
TACGATCTCG GTGGAGATGG AGCGATGTTT TGGATGCTCG CGGGAATCGG GGAAGGCTGG
GACAAGGATG AAAGGGGGTA CTATCCGGAC TACGACGGTT TCAGAATAGT GAACGACGAC
AGTCCAGAAG CGGAACTGAT CAGAGAATAC GCGAAGCTGT TCAACACAGG TGAAGACATA
AGAGAAGACA CCTGCTCTTT CATCCTTCCA AAAGACGGCA TGGAGATCAA AAAGACCGTG
GAAGTGAGAG TTGGTGTTTT CGACTACAGC AACACGTTTG AAAAGTTGTC TGTCAAAGTC
GAAGATCTGG TTTTTGAAAA TGAGATAGAG CATCTCGGAT ACGGAATTTA CGGCTTCGAT
CTCGACACAA CCCGGATCCC GGATGGAGAA CATGAAATGT TCCTTGAAGG CCACTTTCAG
GGAAAGACGG TGAAAGACTC TATCAAAGCG AAAGTGGTGA ACGAAGCGCG GTACGTGCTC
GCAGAGGAGG TTGATTTTTC CTCTTCAGAG GAGGTGAAAA GCTGGTGGAA CAGCGGAACC
TGGCAGGCAG AGTTCGGGTC ACCTGACATT GAATGGAACG GTGAGGTGGG AAATGGAGCA
CTGCAGCTGA ACGTGAAACT GCCCGGAAAG AGCGACTGGG AAGAAGTGAG AGTAGCAAGG
AAGTTCGAAA GACTCTCAGA ATGTGAGATC CTCGAGTACG ACATCTACAT TCCAAACGTC
GAGGGACTCA AGGGAAGGTT GAGGCCGTAC GCGGTTCTGA ACCCCGGCTG GGTGAAGATA
GGCCTCGACA TGAACAACGC GAACGTGGAA AGTGCGGAGA TCATCACTTT CGGCGGAAAA
GAGTACAGAA GATTCCATGT AAGAATTGAG TTCGACAGAA CAGCGGGGGT GAAAGAACTT
CACATAGGAA TTGTCGGTGA TCATCTGAGG TACGATGGAC CGATTTTCAT CGATAATGTG
AGACTTTATA AAAGAACAGG AGGTATGTGA
 
Protein sequence
MRRFMFILLI VELSFVLFAS DEFVKVENGK FALNGKEFRF IGSNNYYMHY KSNRMIDSVL 
ESARDMGIKV LRIWGFLDGE SYCRDKNTYM HPEPGVFGVP EGISNAQSGF ERLDYTVAKA
KELGIKLVIV LVNNWDDFGG MNQYVRWFGG THHDDFYRDE KIKEEYKKYV SFLVNHVNTY
TGVPYREEPT IMAWELANEP RCETDKSGNT LVEWVKEMSS YIKSLDPNHL VAVGDEGFFS
NYEGFKPYGG EAEWAYNGWS GVDWKKLLSI ETVDFGTFHL YPSHWGVSPE NYAQWGAKWI
EDHIKIAKEI GKPVVLEEYG IPKSAPVNRT AIYRLWNDLV YDLGGDGAMF WMLAGIGEGW
DKDERGYYPD YDGFRIVNDD SPEAELIREY AKLFNTGEDI REDTCSFILP KDGMEIKKTV
EVRVGVFDYS NTFEKLSVKV EDLVFENEIE HLGYGIYGFD LDTTRIPDGE HEMFLEGHFQ
GKTVKDSIKA KVVNEARYVL AEEVDFSSSE EVKSWWNSGT WQAEFGSPDI EWNGEVGNGA
LQLNVKLPGK SDWEEVRVAR KFERLSECEI LEYDIYIPNV EGLKGRLRPY AVLNPGWVKI
GLDMNNANVE SAEIITFGGK EYRRFHVRIE FDRTAGVKEL HIGIVGDHLR YDGPIFIDNV
RLYKRTGGM