| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1591 |
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| Symbol | |
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| ID | 6093040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1603667 |
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| End bp | 1605676 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642488792 |
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| Product | carbohydrate binding module 27 |
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| Protein accession | YP_001739610 |
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| Protein GI | 170289372 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3934] Endo-beta-mannanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00319954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGAT TTATGTTCAT TTTATTGATC GTTGAGCTCT CTTTCGTTCT CTTTGCAAGT
GACGAGTTCG TGAAAGTGGA AAACGGAAAA TTCGCTCTGA ACGGAAAAGA ATTCAGATTC
ATTGGAAGCA ACAACTACTA CATGCACTAC AAGAGCAACA GAATGATAGA CAGTGTTCTG
GAGAGTGCCA GAGACATGGG TATAAAGGTC CTCAGAATCT GGGGTTTCCT CGACGGGGAG
AGTTACTGCA GAGACAAGAA CACCTACATG CATCCTGAGC CCGGTGTTTT CGGGGTGCCA
GAAGGAATAT CGAACGCCCA GAGCGGTTTC GAAAGACTCG ACTACACAGT TGCGAAAGCG
AAAGAACTCG GTATAAAACT TGTCATTGTT CTTGTGAACA ACTGGGACGA CTTCGGTGGA
ATGAACCAGT ACGTGAGGTG GTTTGGAGGA ACCCATCACG ACGATTTCTA CAGAGATGAG
AAGATCAAAG AAGAGTACAA AAAGTACGTC TCCTTCCTCG TAAACCATGT CAATACCTAC
ACGGGAGTTC CTTACAGGGA AGAGCCCACC ATCATGGCCT GGGAGCTTGC AAACGAACCG
CGCTGTGAGA CGGACAAATC GGGGAACACG CTCGTTGAGT GGGTGAAGGA GATGAGCTCC
TACATAAAGA GTCTGGATCC CAACCACCTC GTGGCTGTGG GGGACGAAGG ATTCTTCAGC
AACTACGAAG GATTCAAACC TTACGGTGGA GAAGCCGAGT GGGCCTACAA CGGCTGGTCC
GGTGTTGACT GGAAGAAGCT CCTTTCGATA GAGACGGTGG ACTTCGGCAC GTTCCACCTC
TATCCGTCCC ACTGGGGTGT CAGTCCAGAG AACTATGCCC AGTGGGGAGC GAAGTGGATA
GAAGACCACA TAAAGATCGC AAAAGAGATC GGAAAACCCG TTGTTCTGGA AGAATATGGA
ATTCCAAAGA GTGCGCCAGT TAACAGAACG GCCATCTACA GACTCTGGAA CGATCTGGTC
TACGATCTCG GTGGAGATGG AGCGATGTTT TGGATGCTCG CGGGAATCGG GGAAGGCTGG
GACAAGGATG AAAGGGGGTA CTATCCGGAC TACGACGGTT TCAGAATAGT GAACGACGAC
AGTCCAGAAG CGGAACTGAT CAGAGAATAC GCGAAGCTGT TCAACACAGG TGAAGACATA
AGAGAAGACA CCTGCTCTTT CATCCTTCCA AAAGACGGCA TGGAGATCAA AAAGACCGTG
GAAGTGAGAG TTGGTGTTTT CGACTACAGC AACACGTTTG AAAAGTTGTC TGTCAAAGTC
GAAGATCTGG TTTTTGAAAA TGAGATAGAG CATCTCGGAT ACGGAATTTA CGGCTTCGAT
CTCGACACAA CCCGGATCCC GGATGGAGAA CATGAAATGT TCCTTGAAGG CCACTTTCAG
GGAAAGACGG TGAAAGACTC TATCAAAGCG AAAGTGGTGA ACGAAGCGCG GTACGTGCTC
GCAGAGGAGG TTGATTTTTC CTCTTCAGAG GAGGTGAAAA GCTGGTGGAA CAGCGGAACC
TGGCAGGCAG AGTTCGGGTC ACCTGACATT GAATGGAACG GTGAGGTGGG AAATGGAGCA
CTGCAGCTGA ACGTGAAACT GCCCGGAAAG AGCGACTGGG AAGAAGTGAG AGTAGCAAGG
AAGTTCGAAA GACTCTCAGA ATGTGAGATC CTCGAGTACG ACATCTACAT TCCAAACGTC
GAGGGACTCA AGGGAAGGTT GAGGCCGTAC GCGGTTCTGA ACCCCGGCTG GGTGAAGATA
GGCCTCGACA TGAACAACGC GAACGTGGAA AGTGCGGAGA TCATCACTTT CGGCGGAAAA
GAGTACAGAA GATTCCATGT AAGAATTGAG TTCGACAGAA CAGCGGGGGT GAAAGAACTT
CACATAGGAA TTGTCGGTGA TCATCTGAGG TACGATGGAC CGATTTTCAT CGATAATGTG
AGACTTTATA AAAGAACAGG AGGTATGTGA
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| Protein sequence | MRRFMFILLI VELSFVLFAS DEFVKVENGK FALNGKEFRF IGSNNYYMHY KSNRMIDSVL
ESARDMGIKV LRIWGFLDGE SYCRDKNTYM HPEPGVFGVP EGISNAQSGF ERLDYTVAKA
KELGIKLVIV LVNNWDDFGG MNQYVRWFGG THHDDFYRDE KIKEEYKKYV SFLVNHVNTY
TGVPYREEPT IMAWELANEP RCETDKSGNT LVEWVKEMSS YIKSLDPNHL VAVGDEGFFS
NYEGFKPYGG EAEWAYNGWS GVDWKKLLSI ETVDFGTFHL YPSHWGVSPE NYAQWGAKWI
EDHIKIAKEI GKPVVLEEYG IPKSAPVNRT AIYRLWNDLV YDLGGDGAMF WMLAGIGEGW
DKDERGYYPD YDGFRIVNDD SPEAELIREY AKLFNTGEDI REDTCSFILP KDGMEIKKTV
EVRVGVFDYS NTFEKLSVKV EDLVFENEIE HLGYGIYGFD LDTTRIPDGE HEMFLEGHFQ
GKTVKDSIKA KVVNEARYVL AEEVDFSSSE EVKSWWNSGT WQAEFGSPDI EWNGEVGNGA
LQLNVKLPGK SDWEEVRVAR KFERLSECEI LEYDIYIPNV EGLKGRLRPY AVLNPGWVKI
GLDMNNANVE SAEIITFGGK EYRRFHVRIE FDRTAGVKEL HIGIVGDHLR YDGPIFIDNV
RLYKRTGGM
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