| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1076 |
|---|
| Symbol | |
|---|
| ID | 7087849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1269080 |
|---|
| End bp | 1271677 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643459987 |
|---|
| Product | membrane of secreted protein |
|---|
| Protein accession | YP_002357014 |
|---|
| Protein GI | 217972263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00939077 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC TCACCAAATT AGCAGCAGTG CTTGCGTTAT CACCTTTGTT ACCGTTATTG
AGCGCGAGTG TTTTTGCGGC TGATGCGAAG GTTAAAGACG GAGTGTTGTA CCTAGACGAT
GGCAGTGAAG TGCGTAACTT TGGCGTGAAT TACTCTGCGC CATTTGCCTT TACCTACCGT
GCAATGGTTA AAAGCGGTGT TGATATGCAC GCCGCTATCG ACATGGATGT GGCGCATCTT
AAGCGTCTTA GTGTGACGGG CTATCGCGTG CACGTTTTTG ACCGAGAAGT TTCTGATATA
AAAGGGAACT TAGTCGATAA TGTTCATCTA GAACTGCTGG ATTATTTACT GAATAAGCTT
GCCGCTAATG GTATTCGCGC CATTATTACC CCGATTGCGT GGTGGGGTAA TGGTTATCCA
GCGCCGGATA CAGAGACTCA AGGATTTGCT AATGGCTTTA CAAAAGCAGA GATGAATACT
GAGCCTAAGG CTATTGCGGC AACGCATACT TATCTGAAAC AATTCTTTGC CCATAAGAAC
CGTTATAGCG GTGTGAGCTA TGGTCAGGAT GCCAACATTA TTGCCTTTGA ATTGTTTAAC
GAGCCGAGTC ACCATGGCGA TGTTTATCAG AGTCAAAACT ATATCAATGG CTTAATTAAG
GTGAGCCATG AGAGTGGCGT AACGAAACCG CTATTTTATA ACATTAGCGA GCAGGGCGAC
AACCCAGCCT TTGCAAAAGC GGTATGCGAT TCTAATATCG ATGGAATTGC CTATCAGTGG
TATCCGACTG GGCTGGTAAA AATGAGCCGG ATTAACAGTA ATACTCTGGT CAATGTTGCC
CATTACACTA ATCCTTTCGC CGATATTGAA GCTTGTAAGA CGAAGGCGAA AATGATTTAT
GAGTTTGATG CTGCAGATGT CACGGGCAGT GTCATGTATC CGGCAATGGC ACGCAGTTTC
CGTGAGGCAG GTTTCCAATG GGCGACCCAG TTTGCCTATG ATCCGGCAGT CATTGCGAGC
AGTAACGCTG ATTACAATAC CCATTTTCTT AATTTGCTTT ACACCCCGTC AAAAGCCATC
AGCTTTTTGA TTGCAGGTGA GGTATTCAGG CAAGTTCCCC GCGGTTTTGA GGGCGGTGCT
TATCCGCAAA GTAACCATTT TGCTGATGTG ACTTTAGATT ATGGCCACGA TTTCAGTGTA
TTAAATCAGC CAGCGCGTTT TTATTACAGT AATAATACAG ATGAAAAGCC ACAAGCGCCT
AAAAAGCTTG AGCATATCGC TGGCGTTGGC AGTTCTGTAA TCGTTAATTA TGACGGTAAT
GGTAGCTACT TTTTAGATAA GATCTCTGAT GGTTTATGGC AATTAGAAGT GTATCCCGAT
GCGTTAGGGT TATCTGATCC ACATCAGAAT TCGAGCTTAA AGCGTGAAGC CGTTCGTTTG
TATCAAGCCT CGCGACACTT TAATCTGGCT CTGTCGGATT TAGGCCAACA ATATTGGCTG
CAAGGGGTCA ATCAAGGTAA TCGCGCTTCG CTACAAGCCA GCAAAGGCAC AGTGCAGTTA
ACGCCGGGCA AGTATTTAGT CGCTAAAAAT AAATCCTTAC TTGCTTCAAC TCAGTCCAAG
ATTGATGACC ATTATTATCT GCCGCCTATG CCGCATCAAA CCTTAGCCTT AGTGCACCAA
AATCTGCAGG CGCTGAATCA AGGTGATGCA CTCACCTTTA GCGCTAGCGT GATGGATGCC
AAAGCCATAG ATAAAGTTGA GCTTTATGTT CGCTATCTTG GTGATAGTGA GTTTAAGGTT
TATCCGATGG AGGCCCATGG CAGTGTCTAT CGTCAAACCC TCACTGATGT CAAAAACTGG
CAGCGAGCAG GGGCGATTGA GTATGCCTTT GTAGTGACTC AACAAGCCTC AGGTCAAACA
AGCTTCCCCG GTAATGCCGA GGGAAATCCG AATGAGTGGG ATTTTGTGAA GAGTAGCGGT
GCAGCTTTTT ATCAATTTGA GTGGCGCGCG AAAGGCACTC CGGTGAGCTT GTTTAATGCT
TCGTTCGATA GGGACAATTT AATCTACCCA CAAAATGCCC GTAGTGAATG GCGCTTTCAA
AGTGGTGTGC GCGATCAAGG GCTTGGGTTG CAGCTTTATA TCCCAAGTCT AGTGACATCT
ACTACAAGTT CAGAGGCGGA CAATGTGCTC GTGCGTATCT CACCCGCTAA GGATCATGCG
CTGTCACAAC GCAACCTTAA GGGATACGAT GCCGTGCAAC TACGTATCTA TGCCGACCAA
GCTAATGAGC ATGTGTCTGT CGCACTGTTA AATGAGCATG GGCTCGCCTA TGGCGCGGTT
GTGACATTGC AGGCTGGGTG GCAATCCATT ACCATGCCTG TAGTAGATTT ATCACCCATG
CCGACTGTAT TAACAAAGGC TTATCCTATG TTTATGCCAA TGAATTATCC TCATTCAGAA
CCCTATACGT TCGACGCTGA GGCGCTGAGC AAATTACAGG GCGTGCAGTT GGGGTTTGTG
GCAAAGGATT ATGAAATCAA GGCGAGGGAT AAAGGCCATA ATCTCGTCTT ATCTGAAATA
AATTTAATTA AGAGGTAA
|
|---|
| Protein sequence | MKLLTKLAAV LALSPLLPLL SASVFAADAK VKDGVLYLDD GSEVRNFGVN YSAPFAFTYR
AMVKSGVDMH AAIDMDVAHL KRLSVTGYRV HVFDREVSDI KGNLVDNVHL ELLDYLLNKL
AANGIRAIIT PIAWWGNGYP APDTETQGFA NGFTKAEMNT EPKAIAATHT YLKQFFAHKN
RYSGVSYGQD ANIIAFELFN EPSHHGDVYQ SQNYINGLIK VSHESGVTKP LFYNISEQGD
NPAFAKAVCD SNIDGIAYQW YPTGLVKMSR INSNTLVNVA HYTNPFADIE ACKTKAKMIY
EFDAADVTGS VMYPAMARSF REAGFQWATQ FAYDPAVIAS SNADYNTHFL NLLYTPSKAI
SFLIAGEVFR QVPRGFEGGA YPQSNHFADV TLDYGHDFSV LNQPARFYYS NNTDEKPQAP
KKLEHIAGVG SSVIVNYDGN GSYFLDKISD GLWQLEVYPD ALGLSDPHQN SSLKREAVRL
YQASRHFNLA LSDLGQQYWL QGVNQGNRAS LQASKGTVQL TPGKYLVAKN KSLLASTQSK
IDDHYYLPPM PHQTLALVHQ NLQALNQGDA LTFSASVMDA KAIDKVELYV RYLGDSEFKV
YPMEAHGSVY RQTLTDVKNW QRAGAIEYAF VVTQQASGQT SFPGNAEGNP NEWDFVKSSG
AAFYQFEWRA KGTPVSLFNA SFDRDNLIYP QNARSEWRFQ SGVRDQGLGL QLYIPSLVTS
TTSSEADNVL VRISPAKDHA LSQRNLKGYD AVQLRIYADQ ANEHVSVALL NEHGLAYGAV
VTLQAGWQSI TMPVVDLSPM PTVLTKAYPM FMPMNYPHSE PYTFDAEALS KLQGVQLGFV
AKDYEIKARD KGHNLVLSEI NLIKR
|
|---|
| |