7 homologs were found in PanDaTox collection
for query gene Hoch_3070 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013440  Hoch_3070  low-density lipoprotein receptor YWTD repeat protein  100 
 
 		 315 aa  613  9.999999999999999e-175  Haliangium ochraceum DSM 14365  Bacteria  normal  0.722808  normal  0.473204 
 
 
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NC_009767  Rcas_3703  dystroglycan-type cadherin domain-containing protein  26.86 
 
 		 4022 aa  58.9  0.0000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  decreased coverage  0.00000991592 
 
 
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NC_013440  Hoch_3457  low-density lipoprotein receptor YWTD repeat protein  25.56 
 
 		 335 aa  54.7  0.000002  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0967146 
 
 
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NC_011831  Cagg_3279  PA14 domain protein  26.54 
 
 		 4009 aa  53.1  0.000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.0589032 
 
 
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NC_013739  Cwoe_2225  low-density lipoprotein receptor YWTD repeat protein  30 
 
 		 490 aa  44.3  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.338288 
 
 
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NC_011887  Mnod_8029  40-residue YVTN family beta-propeller repeat protein  28.76 
 
 		 314 aa  43.9  0.004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.882346  n/a   
 
 
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NC_008786  Veis_1858  serine/threonine-protein kinase  27.2 
 
 		 274 aa  42.7  0.007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.129879 
 
 
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