8 homologs were found in PanDaTox collection
for query gene HMPREF0424_0524 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_0524  hypothetical protein  100 
 
 		 259 aa  513  1e-144  Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.000443046 
 
 
-
 
NC_013203  Apar_0436  ABC-2 type transporter  34.82 
 
 		 254 aa  139  3.9999999999999997e-32  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_21540  ABC-type multidrug transport system, permease component  33.03 
 
 		 249 aa  105  5e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.937683 
 
 
-
 
NC_013174  Jden_0229  hypothetical protein  29.37 
 
 		 250 aa  105  7e-22  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0141288  normal  1 
 
 
-
 
NC_010001  Cphy_1006  ABC-2 type transporter  25.99 
 
 		 260 aa  53.9  0.000003  Clostridium phytofermentans ISDg  Bacteria  normal  0.0898829  n/a   
 
 
-
 
NC_013595  Sros_4308  hypothetical protein  26.53 
 
 		 260 aa  43.5  0.003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.318258 
 
 
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NC_010644  Emin_1047  ABC-2 type transporter  26.15 
 
 		 371 aa  42.7  0.005  Elusimicrobium minutum Pei191  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_0987  ABC-2 type transporter  26.67 
 
 		 247 aa  42  0.009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.0449521 
 
 
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